Cargando…

Diabetes mellitus susceptibility with varied diseased phenotypes and its comparison with phenome interactome networks

An emerging area of interest in understanding disease phenotypes is systems genomics. Complex diseases such as diabetes have played an important role towards understanding the susceptible genes and mutations. A wide number of methods have been employed and strategies such as polygenic risk score and...

Descripción completa

Detalles Bibliográficos
Autores principales: Rout, Madhusmita, Kour, Bhumandeep, Vuree, Sugunakar, Lulu, Sajitha S, Medicherla, Krishna Mohan, Suravajhala, Prashanth
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Baishideng Publishing Group Inc 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9254192/
https://www.ncbi.nlm.nih.gov/pubmed/35949812
http://dx.doi.org/10.12998/wjcc.v10.i18.5957
_version_ 1784740641333313536
author Rout, Madhusmita
Kour, Bhumandeep
Vuree, Sugunakar
Lulu, Sajitha S
Medicherla, Krishna Mohan
Suravajhala, Prashanth
author_facet Rout, Madhusmita
Kour, Bhumandeep
Vuree, Sugunakar
Lulu, Sajitha S
Medicherla, Krishna Mohan
Suravajhala, Prashanth
author_sort Rout, Madhusmita
collection PubMed
description An emerging area of interest in understanding disease phenotypes is systems genomics. Complex diseases such as diabetes have played an important role towards understanding the susceptible genes and mutations. A wide number of methods have been employed and strategies such as polygenic risk score and allele frequencies have been useful, but understanding the candidate genes harboring those mutations is an unmet goal. In this perspective, using systems genomic approaches, we highlight the application of phenome-interactome networks in diabetes and provide deep insights. LINC01128, which we previously described as candidate for diabetes, is shown as an example to discuss the approach.
format Online
Article
Text
id pubmed-9254192
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher Baishideng Publishing Group Inc
record_format MEDLINE/PubMed
spelling pubmed-92541922022-08-09 Diabetes mellitus susceptibility with varied diseased phenotypes and its comparison with phenome interactome networks Rout, Madhusmita Kour, Bhumandeep Vuree, Sugunakar Lulu, Sajitha S Medicherla, Krishna Mohan Suravajhala, Prashanth World J Clin Cases Minireviews An emerging area of interest in understanding disease phenotypes is systems genomics. Complex diseases such as diabetes have played an important role towards understanding the susceptible genes and mutations. A wide number of methods have been employed and strategies such as polygenic risk score and allele frequencies have been useful, but understanding the candidate genes harboring those mutations is an unmet goal. In this perspective, using systems genomic approaches, we highlight the application of phenome-interactome networks in diabetes and provide deep insights. LINC01128, which we previously described as candidate for diabetes, is shown as an example to discuss the approach. Baishideng Publishing Group Inc 2022-06-26 2022-06-26 /pmc/articles/PMC9254192/ /pubmed/35949812 http://dx.doi.org/10.12998/wjcc.v10.i18.5957 Text en ©The Author(s) 2022. Published by Baishideng Publishing Group Inc. All rights reserved. https://creativecommons.org/licenses/by-nc/4.0/This article is an open-access article that was selected by an in-house editor and fully peer-reviewed by external reviewers. It is distributed in accordance with the Creative Commons Attribution NonCommercial (CC BY-NC 4.0) license, which permits others to distribute, remix, adapt, build upon this work non-commercially, and license their derivative works on different terms, provided the original work is properly cited and the use is non-commercial. See: https://creativecommons.org/Licenses/by-nc/4.0/
spellingShingle Minireviews
Rout, Madhusmita
Kour, Bhumandeep
Vuree, Sugunakar
Lulu, Sajitha S
Medicherla, Krishna Mohan
Suravajhala, Prashanth
Diabetes mellitus susceptibility with varied diseased phenotypes and its comparison with phenome interactome networks
title Diabetes mellitus susceptibility with varied diseased phenotypes and its comparison with phenome interactome networks
title_full Diabetes mellitus susceptibility with varied diseased phenotypes and its comparison with phenome interactome networks
title_fullStr Diabetes mellitus susceptibility with varied diseased phenotypes and its comparison with phenome interactome networks
title_full_unstemmed Diabetes mellitus susceptibility with varied diseased phenotypes and its comparison with phenome interactome networks
title_short Diabetes mellitus susceptibility with varied diseased phenotypes and its comparison with phenome interactome networks
title_sort diabetes mellitus susceptibility with varied diseased phenotypes and its comparison with phenome interactome networks
topic Minireviews
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9254192/
https://www.ncbi.nlm.nih.gov/pubmed/35949812
http://dx.doi.org/10.12998/wjcc.v10.i18.5957
work_keys_str_mv AT routmadhusmita diabetesmellitussusceptibilitywithvarieddiseasedphenotypesanditscomparisonwithphenomeinteractomenetworks
AT kourbhumandeep diabetesmellitussusceptibilitywithvarieddiseasedphenotypesanditscomparisonwithphenomeinteractomenetworks
AT vureesugunakar diabetesmellitussusceptibilitywithvarieddiseasedphenotypesanditscomparisonwithphenomeinteractomenetworks
AT lulusajithas diabetesmellitussusceptibilitywithvarieddiseasedphenotypesanditscomparisonwithphenomeinteractomenetworks
AT medicherlakrishnamohan diabetesmellitussusceptibilitywithvarieddiseasedphenotypesanditscomparisonwithphenomeinteractomenetworks
AT suravajhalaprashanth diabetesmellitussusceptibilitywithvarieddiseasedphenotypesanditscomparisonwithphenomeinteractomenetworks