Cargando…

Dynamics and growth rate implications of ribosomes and mRNAs interaction in E. coli

Understanding how cells grow and adapt under various nutrient conditions is pivotal in the study of biological stoichiometry. Recent studies provide empirical evidence that cells use multiple strategies to maintain an optimal protein production rate under different nutrient conditions. Mathematical...

Descripción completa

Detalles Bibliográficos
Autores principales:	Phan, Tin, He, Changhan, Loladze, Irakli, Prater, Clay, Elser, Jim, Kuang, Yang
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Elsevier 2022
Materias:	Research Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9254350/ https://www.ncbi.nlm.nih.gov/pubmed/35800243 http://dx.doi.org/10.1016/j.heliyon.2022.e09820

Ejemplares similares

Revisiting the growth rate hypothesis: Towards a holistic stoichiometric understanding of growth
por: Isanta‐Navarro, Jana, et al.
Publicado: (2022)

Slippery ribosomes prefer shapeshifting mRNAs
por: Dinman, Jonathan D.
Publicado: (2019)

Escherichia coli Ribosomal Protein S1 Unfolds Structured mRNAs Onto the Ribosome for Active Translation Initiation
por: Duval, Mélodie, et al.
Publicado: (2013)

Ribosomal selection of mRNAs with degenerate initiation triplets
por: Chengguang, He, et al.
Publicado: (2017)

Mechanisms and biomedical implications of –1 programmed ribosome frameshifting on viral and bacterial mRNAs
por: Korniy, Natalia, et al.
Publicado: (2019)

Sequence Features of E. coli mRNAs Affect Their Degradation
por: Lenz, Gal, et al.
Publicado: (2011)

Evidence for a role of initiation factor 3 in recycling of ribosomal complexes stalled on mRNAs in Escherichia coli
por: Singh, N. S., et al.
Publicado: (2005)

Evidence for a cytoplasmic pool of ribosome-free mRNAs encoding inner membrane proteins in Escherichia coli
por: Benhalevy, Daniel, et al.
Publicado: (2017)

How the initiating ribosome copes with ppGpp to translate mRNAs
por: Vinogradova, Daria S., et al.
Publicado: (2020)

Exon Junction Complexes Show a Distributional Bias toward Alternatively Spliced mRNAs and against mRNAs Coding for Ribosomal Proteins
por: Hauer, Christian, et al.
Publicado: (2016)

Toward the mechanism of eIF4F-mediated ribosomal attachment to mammalian capped mRNAs
por: Kumar, Parimal, et al.
Publicado: (2016)

Ribosome collisions alter frameshifting at translational reprogramming motifs in bacterial mRNAs
por: Smith, Angela M., et al.
Publicado: (2019)

Coupled protein synthesis and ribosome-guided piRNA processing on mRNAs
por: Sun, Yu H., et al.
Publicado: (2021)

Selective recruitment of stress-responsive mRNAs to ribosomes for translation by acetylated protein S1 during nutrient stress in Escherichia coli
por: Zhang, Bai-Qing, et al.
Publicado: (2022)

Hypoxia influences polysome distribution of human ribosomal protein S12 and alternative splicing of ribosomal protein mRNAs
por: Brumwell, Andrea, et al.
Publicado: (2020)

DHX29 and eIF3 cooperate in ribosomal scanning on structured mRNAs during translation initiation
por: Pisareva, Vera P., et al.
Publicado: (2016)

The endonuclease Cue2 cleaves mRNAs at stalled ribosomes during No Go Decay
por: D'Orazio, Karole N, et al.
Publicado: (2019)

Immunoprecipitation of Ribosome-Bound mRNAs from Astrocytic Perisynaptic Processes of the Mouse Hippocampus
por: Mazaré, Noémie, et al.
Publicado: (2020)

Ribosome Traffic on mRNAs Maps to Gene Ontology: Genome-wide Quantification of Translation Initiation Rates and Polysome Size Regulation
por: Ciandrini, Luca, et al.
Publicado: (2013)

Inhibition of Ribosome Assembly and Ribosome Translation Has Distinctly Different Effects on Abundance and Paralogue Composition of Ribosomal Protein mRNAs in Saccharomyces cerevisiae
por: Shamsuzzaman, Md, et al.
Publicado: (2023)

Local Absence of Secondary Structure Permits Translation of mRNAs that Lack Ribosome-Binding Sites
por: Scharff, Lars B., et al.
Publicado: (2011)

The role of tRNA and ribosome competition in coupling the expression of different mRNAs in Saccharomyces cerevisiae
por: Chu, Dominique, et al.
Publicado: (2011)

Ribosomal protein mRNAs are translationally-regulated during human dendritic cells activation by LPS
por: Ceppi, Maurizio, et al.
Publicado: (2009)

Functionally diverse dendritic mRNAs rapidly associate with ribosomes following a novel experience
por: Ainsley, Joshua, et al.
Publicado: (2014)

The ribosomal protein Asc1/RACK1 is required for efficient translation of short mRNAs
por: Thompson, Mary K, et al.
Publicado: (2016)

Global translation inhibition yields condition-dependent de-repression of ribosome biogenesis mRNAs
por: Cheng, Ze, et al.
Publicado: (2019)

eIF3 Interacts with Selenoprotein mRNAs
por: Hayek, Hassan, et al.
Publicado: (2022)

Profiling of RNA-binding Proteins Interacting With Glucagon and Adipokinetic Hormone mRNAs
por: Ko, Seungbeom, et al.
Publicado: (2022)

mRNAs held back
por: LeBrasseur, Nicole
Publicado: (2006)

Stress management for mRNAs
por: Short, Ben
Publicado: (2010)

Untranslated regions of mRNAs
por: Mignone, Flavio, et al.
Publicado: (2002)

eIF4E exports proliferation mRNAs
por: LeBrasseur, Nicole
Publicado: (2006)

Detection of pks Island mRNAs Using Toehold Sensors in Escherichia coli
por: Heo, Taeyang, et al.
Publicado: (2021)

Analysis of Ribosome-Associated mRNAs in Rice Reveals the Importance of Transcript Size and GC Content in Translation
por: Zhao, Dongyan, et al.
Publicado: (2016)

Reprogramming of translation in yeast cells impaired for ribosome recycling favors short, efficiently translated mRNAs
por: Gaikwad, Swati, et al.
Publicado: (2021)

Protocol to extract actively translated mRNAs from mouse hypothalamus by translating ribosome affinity purification
por: Han, Xingfa, et al.
Publicado: (2021)

The context of the ribosome binding site in mRNAs defines specificity of action of kasugamycin, an inhibitor of translation initiation
por: Zhang, Yan, et al.
Publicado: (2022)

Gemin5-dependent RNA association with polysomes enables selective translation of ribosomal and histone mRNAs
por: Embarc-Buh, Azman, et al.
Publicado: (2022)

Kaposi’s sarcoma-associated herpesvirus induces specialised ribosomes to efficiently translate viral lytic mRNAs
por: Murphy, James C., et al.
Publicado: (2023)

Yeast m(6)A Methylated mRNAs Are Enriched on Translating Ribosomes during Meiosis, and under Rapamycin Treatment
por: Bodi, Zsuzsanna, et al.
Publicado: (2015)

Cannot write session to /tmp/vufind_sessions/sess_aiufh3kc19pk7s5g7l1juqng2d