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Complete chloroplast genome sequence of the carnivorous herb Pinguicula alpina (Lentibulariaceae)
We determined the complete chloroplast genome of Pinguicula alpina, a carnivorous plant using high-throughput sequencing technology. The deduced plastome is a closed circular molecule of 147,479 bp with a quadripartite structure, including a large single-copy region (LSC) of 81,937 bp, a small singl...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Taylor & Francis
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9255049/ https://www.ncbi.nlm.nih.gov/pubmed/35801136 http://dx.doi.org/10.1080/23802359.2022.2086075 |
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author | Li, Jianfang Liu, Zhan-Lin |
author_facet | Li, Jianfang Liu, Zhan-Lin |
author_sort | Li, Jianfang |
collection | PubMed |
description | We determined the complete chloroplast genome of Pinguicula alpina, a carnivorous plant using high-throughput sequencing technology. The deduced plastome is a closed circular molecule of 147,479 bp with a quadripartite structure, including a large single-copy region (LSC) of 81,937 bp, a small single-copy region (SSC) of 13,180 bp, and a pair of inverted repeat regions (IRs) of 26,181 bp. It contains 131 genes, comprising 82 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. The GC content of the plastome, LSC, SSC, and IR regions are 38.1%, 36.1%, 31.4% and 43.0%, respectively. Phylogenetic analysis revealed that P. alpina was related to P. ehlersiae. |
format | Online Article Text |
id | pubmed-9255049 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-92550492022-07-06 Complete chloroplast genome sequence of the carnivorous herb Pinguicula alpina (Lentibulariaceae) Li, Jianfang Liu, Zhan-Lin Mitochondrial DNA B Resour Mitogenome Announcement We determined the complete chloroplast genome of Pinguicula alpina, a carnivorous plant using high-throughput sequencing technology. The deduced plastome is a closed circular molecule of 147,479 bp with a quadripartite structure, including a large single-copy region (LSC) of 81,937 bp, a small single-copy region (SSC) of 13,180 bp, and a pair of inverted repeat regions (IRs) of 26,181 bp. It contains 131 genes, comprising 82 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. The GC content of the plastome, LSC, SSC, and IR regions are 38.1%, 36.1%, 31.4% and 43.0%, respectively. Phylogenetic analysis revealed that P. alpina was related to P. ehlersiae. Taylor & Francis 2022-06-30 /pmc/articles/PMC9255049/ /pubmed/35801136 http://dx.doi.org/10.1080/23802359.2022.2086075 Text en © 2022 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Li, Jianfang Liu, Zhan-Lin Complete chloroplast genome sequence of the carnivorous herb Pinguicula alpina (Lentibulariaceae) |
title | Complete chloroplast genome sequence of the carnivorous herb Pinguicula alpina (Lentibulariaceae) |
title_full | Complete chloroplast genome sequence of the carnivorous herb Pinguicula alpina (Lentibulariaceae) |
title_fullStr | Complete chloroplast genome sequence of the carnivorous herb Pinguicula alpina (Lentibulariaceae) |
title_full_unstemmed | Complete chloroplast genome sequence of the carnivorous herb Pinguicula alpina (Lentibulariaceae) |
title_short | Complete chloroplast genome sequence of the carnivorous herb Pinguicula alpina (Lentibulariaceae) |
title_sort | complete chloroplast genome sequence of the carnivorous herb pinguicula alpina (lentibulariaceae) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9255049/ https://www.ncbi.nlm.nih.gov/pubmed/35801136 http://dx.doi.org/10.1080/23802359.2022.2086075 |
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