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A novel Cuproptosis-related LncRNA signature to predict prognosis in hepatocellular carcinoma

Increased intracellular toxicity due to an imbalance in copper homeostasis caused by copper ion accumulation could regulate the rate of cancer cell growth and proliferation. The goal of this study was to create a novel Cuproptosis-related lncRNA signature that may be utilized to predict survival and...

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Autores principales: Zhang, Genhao, Sun, Jianping, Zhang, Xianwei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9256635/
https://www.ncbi.nlm.nih.gov/pubmed/35790864
http://dx.doi.org/10.1038/s41598-022-15251-1
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author Zhang, Genhao
Sun, Jianping
Zhang, Xianwei
author_facet Zhang, Genhao
Sun, Jianping
Zhang, Xianwei
author_sort Zhang, Genhao
collection PubMed
description Increased intracellular toxicity due to an imbalance in copper homeostasis caused by copper ion accumulation could regulate the rate of cancer cell growth and proliferation. The goal of this study was to create a novel Cuproptosis-related lncRNA signature that may be utilized to predict survival and immunotherapy in HCC patients. Cuproptosis-associated lncRNAs and differentially expressed lncRNAs between HCC tumor tissue and normal tissue were discovered first. By LASSO-Cox analysis, the overlapping lncRNAs were then utilized to build a Cuproptosis-associated lncRNA signature, which might be used to predict patient prognosis and responsiveness to immune checkpoint blockade (ICB) therapy. Differences in the infiltration of immune cell subpopulations between high and low-risk score subgroups were also analyzed. Moreover, a nomogram based on the Cuproptosis-associated lncRNA signature and clinical features was developed and demonstrated to have good predictive potential. Finally, qRT-PCR was performed in HerpG2 and MHCC-97H cell lines to explore whether these lncRNAs were indeed involved in the process of Cuproptosis. In summary, we created a prognostic lncRNA profile linked to Cuproptosis to forecast response to immunotherapy, which may provide a new potential non-apoptotic therapeutic perspective for HCC patients.
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spelling pubmed-92566352022-07-07 A novel Cuproptosis-related LncRNA signature to predict prognosis in hepatocellular carcinoma Zhang, Genhao Sun, Jianping Zhang, Xianwei Sci Rep Article Increased intracellular toxicity due to an imbalance in copper homeostasis caused by copper ion accumulation could regulate the rate of cancer cell growth and proliferation. The goal of this study was to create a novel Cuproptosis-related lncRNA signature that may be utilized to predict survival and immunotherapy in HCC patients. Cuproptosis-associated lncRNAs and differentially expressed lncRNAs between HCC tumor tissue and normal tissue were discovered first. By LASSO-Cox analysis, the overlapping lncRNAs were then utilized to build a Cuproptosis-associated lncRNA signature, which might be used to predict patient prognosis and responsiveness to immune checkpoint blockade (ICB) therapy. Differences in the infiltration of immune cell subpopulations between high and low-risk score subgroups were also analyzed. Moreover, a nomogram based on the Cuproptosis-associated lncRNA signature and clinical features was developed and demonstrated to have good predictive potential. Finally, qRT-PCR was performed in HerpG2 and MHCC-97H cell lines to explore whether these lncRNAs were indeed involved in the process of Cuproptosis. In summary, we created a prognostic lncRNA profile linked to Cuproptosis to forecast response to immunotherapy, which may provide a new potential non-apoptotic therapeutic perspective for HCC patients. Nature Publishing Group UK 2022-07-05 /pmc/articles/PMC9256635/ /pubmed/35790864 http://dx.doi.org/10.1038/s41598-022-15251-1 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Zhang, Genhao
Sun, Jianping
Zhang, Xianwei
A novel Cuproptosis-related LncRNA signature to predict prognosis in hepatocellular carcinoma
title A novel Cuproptosis-related LncRNA signature to predict prognosis in hepatocellular carcinoma
title_full A novel Cuproptosis-related LncRNA signature to predict prognosis in hepatocellular carcinoma
title_fullStr A novel Cuproptosis-related LncRNA signature to predict prognosis in hepatocellular carcinoma
title_full_unstemmed A novel Cuproptosis-related LncRNA signature to predict prognosis in hepatocellular carcinoma
title_short A novel Cuproptosis-related LncRNA signature to predict prognosis in hepatocellular carcinoma
title_sort novel cuproptosis-related lncrna signature to predict prognosis in hepatocellular carcinoma
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9256635/
https://www.ncbi.nlm.nih.gov/pubmed/35790864
http://dx.doi.org/10.1038/s41598-022-15251-1
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