Cargando…

Transcriptome Sequencing of the Striped Cucumber Beetle, Acalymma vittatum (F.), Reveals Numerous Sex-Specific Transcripts and Xenobiotic Detoxification Genes

Acalymma vittatum (F.), the striped cucumber beetle, is an important pest of cucurbit crops in the contintental United States, damaging plants through both direct feeding and vectoring of a bacterial wilt pathogen. Besides providing basic biological knowledge, biosequence data for A. vittatum would...

Descripción completa

Detalles Bibliográficos
Autores principales: Sparks, Michael E., Nelson, David R., Haber, Ariela I., Weber, Donald C., Harrison, Robert L.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9258315/
https://www.ncbi.nlm.nih.gov/pubmed/35822824
http://dx.doi.org/10.3390/biotech9040021
_version_ 1784741522924634112
author Sparks, Michael E.
Nelson, David R.
Haber, Ariela I.
Weber, Donald C.
Harrison, Robert L.
author_facet Sparks, Michael E.
Nelson, David R.
Haber, Ariela I.
Weber, Donald C.
Harrison, Robert L.
author_sort Sparks, Michael E.
collection PubMed
description Acalymma vittatum (F.), the striped cucumber beetle, is an important pest of cucurbit crops in the contintental United States, damaging plants through both direct feeding and vectoring of a bacterial wilt pathogen. Besides providing basic biological knowledge, biosequence data for A. vittatum would be useful towards the development of molecular biopesticides to complement existing population control methods. However, no such datasets currently exist. In this study, three biological replicates apiece of male and female adult insects were sequenced and assembled into a set of 630,139 transcripts (of which 232,899 exhibited hits to one or more sequences in NCBI NR). Quantitative analyses identified 2898 genes differentially expressed across the male–female divide, and qualitative analyses characterized the insect’s resistome, comprising the glutathione S-transferase, carboxylesterase, and cytochrome P450 monooxygenase families of xenobiotic detoxification genes. In summary, these data provide useful insights into genes associated with sex differentiation and this beetle’s innate genetic capacity to develop resistance to synthetic pesticides; furthermore, these genes may serve as useful targets for potential use in molecular-based biocontrol technologies.
format Online
Article
Text
id pubmed-9258315
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-92583152022-07-06 Transcriptome Sequencing of the Striped Cucumber Beetle, Acalymma vittatum (F.), Reveals Numerous Sex-Specific Transcripts and Xenobiotic Detoxification Genes Sparks, Michael E. Nelson, David R. Haber, Ariela I. Weber, Donald C. Harrison, Robert L. BioTech (Basel) Article Acalymma vittatum (F.), the striped cucumber beetle, is an important pest of cucurbit crops in the contintental United States, damaging plants through both direct feeding and vectoring of a bacterial wilt pathogen. Besides providing basic biological knowledge, biosequence data for A. vittatum would be useful towards the development of molecular biopesticides to complement existing population control methods. However, no such datasets currently exist. In this study, three biological replicates apiece of male and female adult insects were sequenced and assembled into a set of 630,139 transcripts (of which 232,899 exhibited hits to one or more sequences in NCBI NR). Quantitative analyses identified 2898 genes differentially expressed across the male–female divide, and qualitative analyses characterized the insect’s resistome, comprising the glutathione S-transferase, carboxylesterase, and cytochrome P450 monooxygenase families of xenobiotic detoxification genes. In summary, these data provide useful insights into genes associated with sex differentiation and this beetle’s innate genetic capacity to develop resistance to synthetic pesticides; furthermore, these genes may serve as useful targets for potential use in molecular-based biocontrol technologies. MDPI 2020-10-27 /pmc/articles/PMC9258315/ /pubmed/35822824 http://dx.doi.org/10.3390/biotech9040021 Text en © 2020 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ).
spellingShingle Article
Sparks, Michael E.
Nelson, David R.
Haber, Ariela I.
Weber, Donald C.
Harrison, Robert L.
Transcriptome Sequencing of the Striped Cucumber Beetle, Acalymma vittatum (F.), Reveals Numerous Sex-Specific Transcripts and Xenobiotic Detoxification Genes
title Transcriptome Sequencing of the Striped Cucumber Beetle, Acalymma vittatum (F.), Reveals Numerous Sex-Specific Transcripts and Xenobiotic Detoxification Genes
title_full Transcriptome Sequencing of the Striped Cucumber Beetle, Acalymma vittatum (F.), Reveals Numerous Sex-Specific Transcripts and Xenobiotic Detoxification Genes
title_fullStr Transcriptome Sequencing of the Striped Cucumber Beetle, Acalymma vittatum (F.), Reveals Numerous Sex-Specific Transcripts and Xenobiotic Detoxification Genes
title_full_unstemmed Transcriptome Sequencing of the Striped Cucumber Beetle, Acalymma vittatum (F.), Reveals Numerous Sex-Specific Transcripts and Xenobiotic Detoxification Genes
title_short Transcriptome Sequencing of the Striped Cucumber Beetle, Acalymma vittatum (F.), Reveals Numerous Sex-Specific Transcripts and Xenobiotic Detoxification Genes
title_sort transcriptome sequencing of the striped cucumber beetle, acalymma vittatum (f.), reveals numerous sex-specific transcripts and xenobiotic detoxification genes
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9258315/
https://www.ncbi.nlm.nih.gov/pubmed/35822824
http://dx.doi.org/10.3390/biotech9040021
work_keys_str_mv AT sparksmichaele transcriptomesequencingofthestripedcucumberbeetleacalymmavittatumfrevealsnumeroussexspecifictranscriptsandxenobioticdetoxificationgenes
AT nelsondavidr transcriptomesequencingofthestripedcucumberbeetleacalymmavittatumfrevealsnumeroussexspecifictranscriptsandxenobioticdetoxificationgenes
AT haberarielai transcriptomesequencingofthestripedcucumberbeetleacalymmavittatumfrevealsnumeroussexspecifictranscriptsandxenobioticdetoxificationgenes
AT weberdonaldc transcriptomesequencingofthestripedcucumberbeetleacalymmavittatumfrevealsnumeroussexspecifictranscriptsandxenobioticdetoxificationgenes
AT harrisonrobertl transcriptomesequencingofthestripedcucumberbeetleacalymmavittatumfrevealsnumeroussexspecifictranscriptsandxenobioticdetoxificationgenes