Cargando…
Suitability of Dried Blood Spots for Accelerating Veterinary Biobank Collections and Identifying Metabolomics Biomarkers With Minimal Resources
Biomarker discovery using biobank samples collected from veterinary clinics would deliver insights into the diverse population of pets and accelerate diagnostic development. The acquisition, preparation, processing, and storage of biofluid samples in sufficient volumes and at a quality suitable for...
Autores principales: | , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9258959/ https://www.ncbi.nlm.nih.gov/pubmed/35812865 http://dx.doi.org/10.3389/fvets.2022.887163 |
_version_ | 1784741666748366848 |
---|---|
author | Allaway, David Alexander, Janet E. Carvell-Miller, Laura J. Reynolds, Rhiannon M. Winder, Catherine L. Weber, Ralf J. M. Lloyd, Gavin R. Southam, Andrew D. Dunn, Warwick B. |
author_facet | Allaway, David Alexander, Janet E. Carvell-Miller, Laura J. Reynolds, Rhiannon M. Winder, Catherine L. Weber, Ralf J. M. Lloyd, Gavin R. Southam, Andrew D. Dunn, Warwick B. |
author_sort | Allaway, David |
collection | PubMed |
description | Biomarker discovery using biobank samples collected from veterinary clinics would deliver insights into the diverse population of pets and accelerate diagnostic development. The acquisition, preparation, processing, and storage of biofluid samples in sufficient volumes and at a quality suitable for later analysis with most suitable discovery methods remain challenging. Metabolomics analysis is a valuable approach to detect health/disease phenotypes. Pre-processing changes during preparation of plasma/serum samples may induce variability that may be overcome using dried blood spots (DBSs). We report a proof of principle study by metabolite fingerprinting applying UHPLC-MS of plasma and DBSs acquired from healthy adult dogs and cats (age range 1–9 years), representing each of 4 dog breeds (Labrador retriever, Beagle, Petit Basset Griffon Vendeen, and Norfolk terrier) and the British domestic shorthair cat (n = 10 per group). Blood samples (20 and 40 μL) for DBSs were loaded onto filter paper, air-dried at room temperature (3 h), and sealed and stored (4°C for ~72 h) prior to storage at −80°C. Plasma from the same blood draw (250 μL) was prepared and stored at −80°C within 1 h of sampling. Metabolite fingerprinting of the DBSs and plasma produced similar numbers of metabolite features that had similar abilities to discriminate between biological classes and correctly assign blinded samples. These provide evidence that DBSs, sampled in a manner amenable to application in in-clinic/in-field processing, are a suitable sample for biomarker discovery using UHPLC-MS metabolomics. Further, given appropriate owner consent, the volumes tested (20–40 μL) make the acquisition of remnant blood from blood samples drawn for other reasons available for biobanking and other research activities. Together, this makes possible large-scale biobanking of veterinary samples, gaining sufficient material sooner and enabling quicker identification of biomarkers of interest. |
format | Online Article Text |
id | pubmed-9258959 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-92589592022-07-07 Suitability of Dried Blood Spots for Accelerating Veterinary Biobank Collections and Identifying Metabolomics Biomarkers With Minimal Resources Allaway, David Alexander, Janet E. Carvell-Miller, Laura J. Reynolds, Rhiannon M. Winder, Catherine L. Weber, Ralf J. M. Lloyd, Gavin R. Southam, Andrew D. Dunn, Warwick B. Front Vet Sci Veterinary Science Biomarker discovery using biobank samples collected from veterinary clinics would deliver insights into the diverse population of pets and accelerate diagnostic development. The acquisition, preparation, processing, and storage of biofluid samples in sufficient volumes and at a quality suitable for later analysis with most suitable discovery methods remain challenging. Metabolomics analysis is a valuable approach to detect health/disease phenotypes. Pre-processing changes during preparation of plasma/serum samples may induce variability that may be overcome using dried blood spots (DBSs). We report a proof of principle study by metabolite fingerprinting applying UHPLC-MS of plasma and DBSs acquired from healthy adult dogs and cats (age range 1–9 years), representing each of 4 dog breeds (Labrador retriever, Beagle, Petit Basset Griffon Vendeen, and Norfolk terrier) and the British domestic shorthair cat (n = 10 per group). Blood samples (20 and 40 μL) for DBSs were loaded onto filter paper, air-dried at room temperature (3 h), and sealed and stored (4°C for ~72 h) prior to storage at −80°C. Plasma from the same blood draw (250 μL) was prepared and stored at −80°C within 1 h of sampling. Metabolite fingerprinting of the DBSs and plasma produced similar numbers of metabolite features that had similar abilities to discriminate between biological classes and correctly assign blinded samples. These provide evidence that DBSs, sampled in a manner amenable to application in in-clinic/in-field processing, are a suitable sample for biomarker discovery using UHPLC-MS metabolomics. Further, given appropriate owner consent, the volumes tested (20–40 μL) make the acquisition of remnant blood from blood samples drawn for other reasons available for biobanking and other research activities. Together, this makes possible large-scale biobanking of veterinary samples, gaining sufficient material sooner and enabling quicker identification of biomarkers of interest. Frontiers Media S.A. 2022-06-22 /pmc/articles/PMC9258959/ /pubmed/35812865 http://dx.doi.org/10.3389/fvets.2022.887163 Text en Copyright © 2022 Allaway, Alexander, Carvell-Miller, Reynolds, Winder, Weber, Lloyd, Southam and Dunn. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Veterinary Science Allaway, David Alexander, Janet E. Carvell-Miller, Laura J. Reynolds, Rhiannon M. Winder, Catherine L. Weber, Ralf J. M. Lloyd, Gavin R. Southam, Andrew D. Dunn, Warwick B. Suitability of Dried Blood Spots for Accelerating Veterinary Biobank Collections and Identifying Metabolomics Biomarkers With Minimal Resources |
title | Suitability of Dried Blood Spots for Accelerating Veterinary Biobank Collections and Identifying Metabolomics Biomarkers With Minimal Resources |
title_full | Suitability of Dried Blood Spots for Accelerating Veterinary Biobank Collections and Identifying Metabolomics Biomarkers With Minimal Resources |
title_fullStr | Suitability of Dried Blood Spots for Accelerating Veterinary Biobank Collections and Identifying Metabolomics Biomarkers With Minimal Resources |
title_full_unstemmed | Suitability of Dried Blood Spots for Accelerating Veterinary Biobank Collections and Identifying Metabolomics Biomarkers With Minimal Resources |
title_short | Suitability of Dried Blood Spots for Accelerating Veterinary Biobank Collections and Identifying Metabolomics Biomarkers With Minimal Resources |
title_sort | suitability of dried blood spots for accelerating veterinary biobank collections and identifying metabolomics biomarkers with minimal resources |
topic | Veterinary Science |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9258959/ https://www.ncbi.nlm.nih.gov/pubmed/35812865 http://dx.doi.org/10.3389/fvets.2022.887163 |
work_keys_str_mv | AT allawaydavid suitabilityofdriedbloodspotsforacceleratingveterinarybiobankcollectionsandidentifyingmetabolomicsbiomarkerswithminimalresources AT alexanderjanete suitabilityofdriedbloodspotsforacceleratingveterinarybiobankcollectionsandidentifyingmetabolomicsbiomarkerswithminimalresources AT carvellmillerlauraj suitabilityofdriedbloodspotsforacceleratingveterinarybiobankcollectionsandidentifyingmetabolomicsbiomarkerswithminimalresources AT reynoldsrhiannonm suitabilityofdriedbloodspotsforacceleratingveterinarybiobankcollectionsandidentifyingmetabolomicsbiomarkerswithminimalresources AT windercatherinel suitabilityofdriedbloodspotsforacceleratingveterinarybiobankcollectionsandidentifyingmetabolomicsbiomarkerswithminimalresources AT weberralfjm suitabilityofdriedbloodspotsforacceleratingveterinarybiobankcollectionsandidentifyingmetabolomicsbiomarkerswithminimalresources AT lloydgavinr suitabilityofdriedbloodspotsforacceleratingveterinarybiobankcollectionsandidentifyingmetabolomicsbiomarkerswithminimalresources AT southamandrewd suitabilityofdriedbloodspotsforacceleratingveterinarybiobankcollectionsandidentifyingmetabolomicsbiomarkerswithminimalresources AT dunnwarwickb suitabilityofdriedbloodspotsforacceleratingveterinarybiobankcollectionsandidentifyingmetabolomicsbiomarkerswithminimalresources |