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Knowledge Graph Applications in Medical Imaging Analysis: A Scoping Review

BACKGROUND. There is an increasing trend to represent domain knowledge in structured graphs, which provide efficient knowledge representations for many downstream tasks. Knowledge graphs are widely used to model prior knowledge in the form of nodes and edges to represent semantically connected knowl...

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Autores principales: Wang, Song, Lin, Mingquan, Ghosal, Tirthankar, Ding, Ying, Peng, Yifan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9259200/
https://www.ncbi.nlm.nih.gov/pubmed/35800847
http://dx.doi.org/10.34133/2022/9841548
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author Wang, Song
Lin, Mingquan
Ghosal, Tirthankar
Ding, Ying
Peng, Yifan
author_facet Wang, Song
Lin, Mingquan
Ghosal, Tirthankar
Ding, Ying
Peng, Yifan
author_sort Wang, Song
collection PubMed
description BACKGROUND. There is an increasing trend to represent domain knowledge in structured graphs, which provide efficient knowledge representations for many downstream tasks. Knowledge graphs are widely used to model prior knowledge in the form of nodes and edges to represent semantically connected knowledge entities, which several works have adopted into different medical imaging applications. METHODS. We systematically searched over five databases to find relevant articles that applied knowledge graphs to medical imaging analysis. After screening, evaluating, and reviewing the selected articles, we performed a systematic analysis. RESULTS. We looked at four applications in medical imaging analysis, including disease classification, disease localization and segmentation, report generation, and image retrieval. We also identified limitations of current work, such as the limited amount of available annotated data and weak generalizability to other tasks. We further identified the potential future directions according to the identified limitations, including employing semisupervised frameworks to alleviate the need for annotated data and exploring task-agnostic models to provide better generalizability. CONCLUSIONS. We hope that our article will provide the readers with aggregated documentation of the state-of-the-art knowledge graph applications for medical imaging to encourage future research.
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spelling pubmed-92592002022-07-06 Knowledge Graph Applications in Medical Imaging Analysis: A Scoping Review Wang, Song Lin, Mingquan Ghosal, Tirthankar Ding, Ying Peng, Yifan Health Data Sci Article BACKGROUND. There is an increasing trend to represent domain knowledge in structured graphs, which provide efficient knowledge representations for many downstream tasks. Knowledge graphs are widely used to model prior knowledge in the form of nodes and edges to represent semantically connected knowledge entities, which several works have adopted into different medical imaging applications. METHODS. We systematically searched over five databases to find relevant articles that applied knowledge graphs to medical imaging analysis. After screening, evaluating, and reviewing the selected articles, we performed a systematic analysis. RESULTS. We looked at four applications in medical imaging analysis, including disease classification, disease localization and segmentation, report generation, and image retrieval. We also identified limitations of current work, such as the limited amount of available annotated data and weak generalizability to other tasks. We further identified the potential future directions according to the identified limitations, including employing semisupervised frameworks to alleviate the need for annotated data and exploring task-agnostic models to provide better generalizability. CONCLUSIONS. We hope that our article will provide the readers with aggregated documentation of the state-of-the-art knowledge graph applications for medical imaging to encourage future research. 2022 2022-06-14 /pmc/articles/PMC9259200/ /pubmed/35800847 http://dx.doi.org/10.34133/2022/9841548 Text en https://creativecommons.org/licenses/by/4.0/Exclusive Licensee Peking University Health Science Center. Distributed under a Creative Commons Attribution License (CC BY 4.0).
spellingShingle Article
Wang, Song
Lin, Mingquan
Ghosal, Tirthankar
Ding, Ying
Peng, Yifan
Knowledge Graph Applications in Medical Imaging Analysis: A Scoping Review
title Knowledge Graph Applications in Medical Imaging Analysis: A Scoping Review
title_full Knowledge Graph Applications in Medical Imaging Analysis: A Scoping Review
title_fullStr Knowledge Graph Applications in Medical Imaging Analysis: A Scoping Review
title_full_unstemmed Knowledge Graph Applications in Medical Imaging Analysis: A Scoping Review
title_short Knowledge Graph Applications in Medical Imaging Analysis: A Scoping Review
title_sort knowledge graph applications in medical imaging analysis: a scoping review
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9259200/
https://www.ncbi.nlm.nih.gov/pubmed/35800847
http://dx.doi.org/10.34133/2022/9841548
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