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Deep learning for fast low-field MRI acquisitions

Low-field (LF) MRI research currently gains momentum from its potential to offer reduced costs and reduced footprints translating into wider accessibility. However, the impeded signal-to-noise ratio inherent to lower magnetic fields can have a significant impact on acquisition times that challenges...

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Autores principales: Ayde, Reina, Senft, Tobias, Salameh, Najat, Sarracanie, Mathieu
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9259619/
https://www.ncbi.nlm.nih.gov/pubmed/35794175
http://dx.doi.org/10.1038/s41598-022-14039-7
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author Ayde, Reina
Senft, Tobias
Salameh, Najat
Sarracanie, Mathieu
author_facet Ayde, Reina
Senft, Tobias
Salameh, Najat
Sarracanie, Mathieu
author_sort Ayde, Reina
collection PubMed
description Low-field (LF) MRI research currently gains momentum from its potential to offer reduced costs and reduced footprints translating into wider accessibility. However, the impeded signal-to-noise ratio inherent to lower magnetic fields can have a significant impact on acquisition times that challenges LF clinical relevance. Undersampling is an effective way to speed up acquisitions in MRI, and recent work has shown encouraging results when combined with deep learning (DL). Yet, training DL models generally requires large databases that are not yet available at LF regimes. Here, we demonstrate the capability of Residual U-net combined with data augmentation to reconstruct magnitude and phase information of undersampled LF MRI scans at 0.1 T with a limited training dataset (n = 10). The model performance was first evaluated in a retrospective study for different acceleration rates and sampling patterns. Ultimately, the DL approach was validated on prospectively acquired, fivefold undersampled LF data. With varying performances associated to the adopted sampling scheme, our results show that the approach investigated can preserve the global structure and the details sharpness in the reconstructed magnitude and phase images. Overall, promising results could be obtained on acquired LF MR images that may bring this research closer to clinical implementation.
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spelling pubmed-92596192022-07-08 Deep learning for fast low-field MRI acquisitions Ayde, Reina Senft, Tobias Salameh, Najat Sarracanie, Mathieu Sci Rep Article Low-field (LF) MRI research currently gains momentum from its potential to offer reduced costs and reduced footprints translating into wider accessibility. However, the impeded signal-to-noise ratio inherent to lower magnetic fields can have a significant impact on acquisition times that challenges LF clinical relevance. Undersampling is an effective way to speed up acquisitions in MRI, and recent work has shown encouraging results when combined with deep learning (DL). Yet, training DL models generally requires large databases that are not yet available at LF regimes. Here, we demonstrate the capability of Residual U-net combined with data augmentation to reconstruct magnitude and phase information of undersampled LF MRI scans at 0.1 T with a limited training dataset (n = 10). The model performance was first evaluated in a retrospective study for different acceleration rates and sampling patterns. Ultimately, the DL approach was validated on prospectively acquired, fivefold undersampled LF data. With varying performances associated to the adopted sampling scheme, our results show that the approach investigated can preserve the global structure and the details sharpness in the reconstructed magnitude and phase images. Overall, promising results could be obtained on acquired LF MR images that may bring this research closer to clinical implementation. Nature Publishing Group UK 2022-07-06 /pmc/articles/PMC9259619/ /pubmed/35794175 http://dx.doi.org/10.1038/s41598-022-14039-7 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Ayde, Reina
Senft, Tobias
Salameh, Najat
Sarracanie, Mathieu
Deep learning for fast low-field MRI acquisitions
title Deep learning for fast low-field MRI acquisitions
title_full Deep learning for fast low-field MRI acquisitions
title_fullStr Deep learning for fast low-field MRI acquisitions
title_full_unstemmed Deep learning for fast low-field MRI acquisitions
title_short Deep learning for fast low-field MRI acquisitions
title_sort deep learning for fast low-field mri acquisitions
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9259619/
https://www.ncbi.nlm.nih.gov/pubmed/35794175
http://dx.doi.org/10.1038/s41598-022-14039-7
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