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Complete chloroplast genome sequence of Kosteletzkya pentacarpos
Kosteletzkya pentacarpos is a promising plant being developed as a salt-tolerant biofuel crop that also the ability to fix heavy metals. Here, high-throughput sequencing technology was used to sequence and assemble the chloroplast genome of K. pentacarpos. The full length of the chloroplast genome i...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9262370/ https://www.ncbi.nlm.nih.gov/pubmed/35814175 http://dx.doi.org/10.1080/23802359.2022.2093665 |
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author | Wang, Zhiquan Yang, Hong Zhang, Fengjiao Yin, Yunlong Gu, Chunsun |
author_facet | Wang, Zhiquan Yang, Hong Zhang, Fengjiao Yin, Yunlong Gu, Chunsun |
author_sort | Wang, Zhiquan |
collection | PubMed |
description | Kosteletzkya pentacarpos is a promising plant being developed as a salt-tolerant biofuel crop that also the ability to fix heavy metals. Here, high-throughput sequencing technology was used to sequence and assemble the chloroplast genome of K. pentacarpos. The full length of the chloroplast genome is 161,777 bp, comprising a large single-copy region of 90,019 bp, a small single-copy region of 18,978 bp, and a pair of inverted repeats of 26,390 bp. A total of 113 genes were annotated, including 79 protein-coding, 30 transfer RNA, and 4 ribosomal RNA genes. Phylogenetic analysis based on whole chloroplast genome sequences showed that K. pentacarpos has a close relationship with Abelmoschus in Malvaceae. This study increases the available genomic information on K. pentacarpos, and provides a basis for the rational exploitation and utilization of germplasm resources. |
format | Online Article Text |
id | pubmed-9262370 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-92623702022-07-08 Complete chloroplast genome sequence of Kosteletzkya pentacarpos Wang, Zhiquan Yang, Hong Zhang, Fengjiao Yin, Yunlong Gu, Chunsun Mitochondrial DNA B Resour Plastome Announcement Kosteletzkya pentacarpos is a promising plant being developed as a salt-tolerant biofuel crop that also the ability to fix heavy metals. Here, high-throughput sequencing technology was used to sequence and assemble the chloroplast genome of K. pentacarpos. The full length of the chloroplast genome is 161,777 bp, comprising a large single-copy region of 90,019 bp, a small single-copy region of 18,978 bp, and a pair of inverted repeats of 26,390 bp. A total of 113 genes were annotated, including 79 protein-coding, 30 transfer RNA, and 4 ribosomal RNA genes. Phylogenetic analysis based on whole chloroplast genome sequences showed that K. pentacarpos has a close relationship with Abelmoschus in Malvaceae. This study increases the available genomic information on K. pentacarpos, and provides a basis for the rational exploitation and utilization of germplasm resources. Taylor & Francis 2022-07-06 /pmc/articles/PMC9262370/ /pubmed/35814175 http://dx.doi.org/10.1080/23802359.2022.2093665 Text en © 2022 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Plastome Announcement Wang, Zhiquan Yang, Hong Zhang, Fengjiao Yin, Yunlong Gu, Chunsun Complete chloroplast genome sequence of Kosteletzkya pentacarpos |
title | Complete chloroplast genome sequence of Kosteletzkya pentacarpos |
title_full | Complete chloroplast genome sequence of Kosteletzkya pentacarpos |
title_fullStr | Complete chloroplast genome sequence of Kosteletzkya pentacarpos |
title_full_unstemmed | Complete chloroplast genome sequence of Kosteletzkya pentacarpos |
title_short | Complete chloroplast genome sequence of Kosteletzkya pentacarpos |
title_sort | complete chloroplast genome sequence of kosteletzkya pentacarpos |
topic | Plastome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9262370/ https://www.ncbi.nlm.nih.gov/pubmed/35814175 http://dx.doi.org/10.1080/23802359.2022.2093665 |
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