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Complete chloroplast genome sequence of Kosteletzkya pentacarpos

Kosteletzkya pentacarpos is a promising plant being developed as a salt-tolerant biofuel crop that also the ability to fix heavy metals. Here, high-throughput sequencing technology was used to sequence and assemble the chloroplast genome of K. pentacarpos. The full length of the chloroplast genome i...

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Autores principales: Wang, Zhiquan, Yang, Hong, Zhang, Fengjiao, Yin, Yunlong, Gu, Chunsun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9262370/
https://www.ncbi.nlm.nih.gov/pubmed/35814175
http://dx.doi.org/10.1080/23802359.2022.2093665
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author Wang, Zhiquan
Yang, Hong
Zhang, Fengjiao
Yin, Yunlong
Gu, Chunsun
author_facet Wang, Zhiquan
Yang, Hong
Zhang, Fengjiao
Yin, Yunlong
Gu, Chunsun
author_sort Wang, Zhiquan
collection PubMed
description Kosteletzkya pentacarpos is a promising plant being developed as a salt-tolerant biofuel crop that also the ability to fix heavy metals. Here, high-throughput sequencing technology was used to sequence and assemble the chloroplast genome of K. pentacarpos. The full length of the chloroplast genome is 161,777 bp, comprising a large single-copy region of 90,019 bp, a small single-copy region of 18,978 bp, and a pair of inverted repeats of 26,390 bp. A total of 113 genes were annotated, including 79 protein-coding, 30 transfer RNA, and 4 ribosomal RNA genes. Phylogenetic analysis based on whole chloroplast genome sequences showed that K. pentacarpos has a close relationship with Abelmoschus in Malvaceae. This study increases the available genomic information on K. pentacarpos, and provides a basis for the rational exploitation and utilization of germplasm resources.
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spelling pubmed-92623702022-07-08 Complete chloroplast genome sequence of Kosteletzkya pentacarpos Wang, Zhiquan Yang, Hong Zhang, Fengjiao Yin, Yunlong Gu, Chunsun Mitochondrial DNA B Resour Plastome Announcement Kosteletzkya pentacarpos is a promising plant being developed as a salt-tolerant biofuel crop that also the ability to fix heavy metals. Here, high-throughput sequencing technology was used to sequence and assemble the chloroplast genome of K. pentacarpos. The full length of the chloroplast genome is 161,777 bp, comprising a large single-copy region of 90,019 bp, a small single-copy region of 18,978 bp, and a pair of inverted repeats of 26,390 bp. A total of 113 genes were annotated, including 79 protein-coding, 30 transfer RNA, and 4 ribosomal RNA genes. Phylogenetic analysis based on whole chloroplast genome sequences showed that K. pentacarpos has a close relationship with Abelmoschus in Malvaceae. This study increases the available genomic information on K. pentacarpos, and provides a basis for the rational exploitation and utilization of germplasm resources. Taylor & Francis 2022-07-06 /pmc/articles/PMC9262370/ /pubmed/35814175 http://dx.doi.org/10.1080/23802359.2022.2093665 Text en © 2022 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Plastome Announcement
Wang, Zhiquan
Yang, Hong
Zhang, Fengjiao
Yin, Yunlong
Gu, Chunsun
Complete chloroplast genome sequence of Kosteletzkya pentacarpos
title Complete chloroplast genome sequence of Kosteletzkya pentacarpos
title_full Complete chloroplast genome sequence of Kosteletzkya pentacarpos
title_fullStr Complete chloroplast genome sequence of Kosteletzkya pentacarpos
title_full_unstemmed Complete chloroplast genome sequence of Kosteletzkya pentacarpos
title_short Complete chloroplast genome sequence of Kosteletzkya pentacarpos
title_sort complete chloroplast genome sequence of kosteletzkya pentacarpos
topic Plastome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9262370/
https://www.ncbi.nlm.nih.gov/pubmed/35814175
http://dx.doi.org/10.1080/23802359.2022.2093665
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