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Adipocyte differentiation between obese and lean conditions depends on changes in miRNA expression
Adipogenesis is the process by which precursor cells, preadipocytes (preACs), differentiate into adipocytes (ACs). Here, we investigated differentially expressed miRNAs (DEMs) between the two conditions to understand the regulatory role of miRNAs in altering adipogenesis-related mRNAs. A total of 81...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9262987/ https://www.ncbi.nlm.nih.gov/pubmed/35798800 http://dx.doi.org/10.1038/s41598-022-15331-2 |
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author | Heo, Yerim Kim, Hyunjung Lim, Jiwon Choi, Sun Shim |
author_facet | Heo, Yerim Kim, Hyunjung Lim, Jiwon Choi, Sun Shim |
author_sort | Heo, Yerim |
collection | PubMed |
description | Adipogenesis is the process by which precursor cells, preadipocytes (preACs), differentiate into adipocytes (ACs). Here, we investigated differentially expressed miRNAs (DEMs) between the two conditions to understand the regulatory role of miRNAs in altering adipogenesis-related mRNAs. A total of 812 and 748 DEMs were obtained in lean and obese conditions, respectively. The up- and downregulated DEMs were highly concordant with each other in both lean and obese conditions; however, DEMs related to adipogenesis in obese conditions were more strongly downregulated than DEMs related to adipogenesis in lean conditions. There were more obese-specific downregulated DEMs than lean-specific downregulated DEMs; in contrast, there were more lean-specific upregulated DEMs than obese-specific upregulated DEMs. Approximately 45% of DEMs were mapped to the list of miRNA-target mRNA pairs when DEMs were matched to the experimentally validated list of miRNA-target mRNA information of miRTarBase. Many of the target mRNAs were differentially expressed genes (DEGs) with functions in processes such as inflammatory responses and fat metabolism. In particular, a total of 25 miRNAs that target three upregulated adipogenesis-associated inflammatory genes (IL-6, TNF-α, and IL-1β) were commonly altered during adipogenesis. Taken together, our study reveals the types of adipogenesis-related miRNAs that are altered and the degree to which they influence healthy or pathogenic adipogenesis. |
format | Online Article Text |
id | pubmed-9262987 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-92629872022-07-09 Adipocyte differentiation between obese and lean conditions depends on changes in miRNA expression Heo, Yerim Kim, Hyunjung Lim, Jiwon Choi, Sun Shim Sci Rep Article Adipogenesis is the process by which precursor cells, preadipocytes (preACs), differentiate into adipocytes (ACs). Here, we investigated differentially expressed miRNAs (DEMs) between the two conditions to understand the regulatory role of miRNAs in altering adipogenesis-related mRNAs. A total of 812 and 748 DEMs were obtained in lean and obese conditions, respectively. The up- and downregulated DEMs were highly concordant with each other in both lean and obese conditions; however, DEMs related to adipogenesis in obese conditions were more strongly downregulated than DEMs related to adipogenesis in lean conditions. There were more obese-specific downregulated DEMs than lean-specific downregulated DEMs; in contrast, there were more lean-specific upregulated DEMs than obese-specific upregulated DEMs. Approximately 45% of DEMs were mapped to the list of miRNA-target mRNA pairs when DEMs were matched to the experimentally validated list of miRNA-target mRNA information of miRTarBase. Many of the target mRNAs were differentially expressed genes (DEGs) with functions in processes such as inflammatory responses and fat metabolism. In particular, a total of 25 miRNAs that target three upregulated adipogenesis-associated inflammatory genes (IL-6, TNF-α, and IL-1β) were commonly altered during adipogenesis. Taken together, our study reveals the types of adipogenesis-related miRNAs that are altered and the degree to which they influence healthy or pathogenic adipogenesis. Nature Publishing Group UK 2022-07-07 /pmc/articles/PMC9262987/ /pubmed/35798800 http://dx.doi.org/10.1038/s41598-022-15331-2 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Heo, Yerim Kim, Hyunjung Lim, Jiwon Choi, Sun Shim Adipocyte differentiation between obese and lean conditions depends on changes in miRNA expression |
title | Adipocyte differentiation between obese and lean conditions depends on changes in miRNA expression |
title_full | Adipocyte differentiation between obese and lean conditions depends on changes in miRNA expression |
title_fullStr | Adipocyte differentiation between obese and lean conditions depends on changes in miRNA expression |
title_full_unstemmed | Adipocyte differentiation between obese and lean conditions depends on changes in miRNA expression |
title_short | Adipocyte differentiation between obese and lean conditions depends on changes in miRNA expression |
title_sort | adipocyte differentiation between obese and lean conditions depends on changes in mirna expression |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9262987/ https://www.ncbi.nlm.nih.gov/pubmed/35798800 http://dx.doi.org/10.1038/s41598-022-15331-2 |
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