Cargando…
Most Pathways Can Be Related to the Pathogenesis of Alzheimer’s Disease
Alzheimer’s disease (AD) is a complex neurodegenerative disorder. The relative contribution of the numerous underlying functional mechanisms is poorly understood. To comprehensively understand the context and distribution of pathways that contribute to AD, we performed text-mining to generate an exh...
Autores principales: | , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9263183/ https://www.ncbi.nlm.nih.gov/pubmed/35813951 http://dx.doi.org/10.3389/fnagi.2022.846902 |
_version_ | 1784742671322972160 |
---|---|
author | Morgan, Sarah L. Naderi, Pourya Koler, Katjuša Pita-Juarez, Yered Prokopenko, Dmitry Vlachos, Ioannis S. Tanzi, Rudolph E. Bertram, Lars Hide, Winston A. |
author_facet | Morgan, Sarah L. Naderi, Pourya Koler, Katjuša Pita-Juarez, Yered Prokopenko, Dmitry Vlachos, Ioannis S. Tanzi, Rudolph E. Bertram, Lars Hide, Winston A. |
author_sort | Morgan, Sarah L. |
collection | PubMed |
description | Alzheimer’s disease (AD) is a complex neurodegenerative disorder. The relative contribution of the numerous underlying functional mechanisms is poorly understood. To comprehensively understand the context and distribution of pathways that contribute to AD, we performed text-mining to generate an exhaustive, systematic assessment of the breadth and diversity of biological pathways within a corpus of 206,324 dementia publication abstracts. A total of 91% (325/335) of Kyoto Encyclopedia of Genes and Genomes (KEGG) pathways have publications containing an association via at least 5 studies, while 63% of pathway terms have at least 50 studies providing a clear association with AD. Despite major technological advances, the same set of top-ranked pathways have been consistently related to AD for 30 years, including AD, immune system, metabolic pathways, cholinergic synapse, long-term depression, proteasome, diabetes, cancer, and chemokine signaling. AD pathways studied appear biased: animal model and human subject studies prioritize different AD pathways. Surprisingly, human genetic discoveries and drug targeting are not enriched in the most frequently studied pathways. Our findings suggest that not only is this disorder incredibly complex, but that its functional reach is also nearly global. As a consequence of our study, research results can now be assessed in the context of the wider AD literature, supporting the design of drug therapies that target a broader range of mechanisms. The results of this study can be explored at www.adpathways.org. |
format | Online Article Text |
id | pubmed-9263183 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-92631832022-07-09 Most Pathways Can Be Related to the Pathogenesis of Alzheimer’s Disease Morgan, Sarah L. Naderi, Pourya Koler, Katjuša Pita-Juarez, Yered Prokopenko, Dmitry Vlachos, Ioannis S. Tanzi, Rudolph E. Bertram, Lars Hide, Winston A. Front Aging Neurosci Neuroscience Alzheimer’s disease (AD) is a complex neurodegenerative disorder. The relative contribution of the numerous underlying functional mechanisms is poorly understood. To comprehensively understand the context and distribution of pathways that contribute to AD, we performed text-mining to generate an exhaustive, systematic assessment of the breadth and diversity of biological pathways within a corpus of 206,324 dementia publication abstracts. A total of 91% (325/335) of Kyoto Encyclopedia of Genes and Genomes (KEGG) pathways have publications containing an association via at least 5 studies, while 63% of pathway terms have at least 50 studies providing a clear association with AD. Despite major technological advances, the same set of top-ranked pathways have been consistently related to AD for 30 years, including AD, immune system, metabolic pathways, cholinergic synapse, long-term depression, proteasome, diabetes, cancer, and chemokine signaling. AD pathways studied appear biased: animal model and human subject studies prioritize different AD pathways. Surprisingly, human genetic discoveries and drug targeting are not enriched in the most frequently studied pathways. Our findings suggest that not only is this disorder incredibly complex, but that its functional reach is also nearly global. As a consequence of our study, research results can now be assessed in the context of the wider AD literature, supporting the design of drug therapies that target a broader range of mechanisms. The results of this study can be explored at www.adpathways.org. Frontiers Media S.A. 2022-06-24 /pmc/articles/PMC9263183/ /pubmed/35813951 http://dx.doi.org/10.3389/fnagi.2022.846902 Text en Copyright © 2022 Morgan, Naderi, Koler, Pita-Juarez, Prokopenko, Vlachos, Tanzi, Bertram and Hide. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Neuroscience Morgan, Sarah L. Naderi, Pourya Koler, Katjuša Pita-Juarez, Yered Prokopenko, Dmitry Vlachos, Ioannis S. Tanzi, Rudolph E. Bertram, Lars Hide, Winston A. Most Pathways Can Be Related to the Pathogenesis of Alzheimer’s Disease |
title | Most Pathways Can Be Related to the Pathogenesis of Alzheimer’s Disease |
title_full | Most Pathways Can Be Related to the Pathogenesis of Alzheimer’s Disease |
title_fullStr | Most Pathways Can Be Related to the Pathogenesis of Alzheimer’s Disease |
title_full_unstemmed | Most Pathways Can Be Related to the Pathogenesis of Alzheimer’s Disease |
title_short | Most Pathways Can Be Related to the Pathogenesis of Alzheimer’s Disease |
title_sort | most pathways can be related to the pathogenesis of alzheimer’s disease |
topic | Neuroscience |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9263183/ https://www.ncbi.nlm.nih.gov/pubmed/35813951 http://dx.doi.org/10.3389/fnagi.2022.846902 |
work_keys_str_mv | AT morgansarahl mostpathwayscanberelatedtothepathogenesisofalzheimersdisease AT naderipourya mostpathwayscanberelatedtothepathogenesisofalzheimersdisease AT kolerkatjusa mostpathwayscanberelatedtothepathogenesisofalzheimersdisease AT pitajuarezyered mostpathwayscanberelatedtothepathogenesisofalzheimersdisease AT prokopenkodmitry mostpathwayscanberelatedtothepathogenesisofalzheimersdisease AT vlachosioanniss mostpathwayscanberelatedtothepathogenesisofalzheimersdisease AT tanzirudolphe mostpathwayscanberelatedtothepathogenesisofalzheimersdisease AT bertramlars mostpathwayscanberelatedtothepathogenesisofalzheimersdisease AT hidewinstona mostpathwayscanberelatedtothepathogenesisofalzheimersdisease |