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Development and integration of VGG and dense transfer-learning systems supported with diverse lung images for discovery of the Coronavirus identity

The contagious SARS-CoV-2 has had a tremendous impact on the life and health of many communities. It was first rampant in early 2019 and so far, 539 million cases of COVID-19 have been reported worldwide. This is reminiscent of the 1918 influenza pandemic. However, we can detect the infected cases o...

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Autores principales: Hamwi, Wael Abdulsalam, Almustafa, Muhammad Mazen
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Author(s). Published by Elsevier Ltd. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9263684/
https://www.ncbi.nlm.nih.gov/pubmed/35822170
http://dx.doi.org/10.1016/j.imu.2022.101004
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author Hamwi, Wael Abdulsalam
Almustafa, Muhammad Mazen
author_facet Hamwi, Wael Abdulsalam
Almustafa, Muhammad Mazen
author_sort Hamwi, Wael Abdulsalam
collection PubMed
description The contagious SARS-CoV-2 has had a tremendous impact on the life and health of many communities. It was first rampant in early 2019 and so far, 539 million cases of COVID-19 have been reported worldwide. This is reminiscent of the 1918 influenza pandemic. However, we can detect the infected cases of COVID-19 by analysing either X-rays or CT, which are presumably considered the least expensive methods. In the existence of state-of-the-art convolutional neural networks (CNNs), which integrate image pre-processing techniques with fully connected layers, we can develop a sophisticated AI system contingent on various pre-trained models. Each pre-trained model we involved in our study assumed its role in extracting some specific features from different chest image datasets in many verified sources, such as (Mendeley, Kaggle, and GitHub). First, for CXR datasets associated with the CNN trained model from the beginning, whereby is comprised of four layers beginning with the Conv2D layer, which comprises 32 filters, followed by the MaxPooling and afterwards, we reiterated similarly. We used two techniques to avoid overgeneralization, the early stopping and the Dropout techniques. After all, the output was one neuron to classify both cases of 0 or 1, followed by a sigmoid function; in addition, we used the Adam optimizer owing to the more improved outcomes than what other optimizers conducted; ultimately, we referred to our findings by using a confusion matrix, classification report (Recall & Precision), sensitivity and specificity; in this approach, we achieved a classification accuracy of 96%. Our three integrated pre-trained models (VGG16, DenseNet201, and DenseNet121) yielded a remarkable test accuracy of 98.81%. Besides, our merged models (VGG16, DenseNet201) trained on CT images with the utmost effort; this model held an accurate test of 99.73% for binary classification with the (Normal/Covid-19) scenario. Comparing our results with related studies shows that our proposed models were superior to the previous CNN machine learning models in terms of various performance metrics. Our pre-trained model associated with the CT dataset achieved 100% of the F1score and the loss value was approximately 0.00268.
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spelling pubmed-92636842022-07-08 Development and integration of VGG and dense transfer-learning systems supported with diverse lung images for discovery of the Coronavirus identity Hamwi, Wael Abdulsalam Almustafa, Muhammad Mazen Inform Med Unlocked Article The contagious SARS-CoV-2 has had a tremendous impact on the life and health of many communities. It was first rampant in early 2019 and so far, 539 million cases of COVID-19 have been reported worldwide. This is reminiscent of the 1918 influenza pandemic. However, we can detect the infected cases of COVID-19 by analysing either X-rays or CT, which are presumably considered the least expensive methods. In the existence of state-of-the-art convolutional neural networks (CNNs), which integrate image pre-processing techniques with fully connected layers, we can develop a sophisticated AI system contingent on various pre-trained models. Each pre-trained model we involved in our study assumed its role in extracting some specific features from different chest image datasets in many verified sources, such as (Mendeley, Kaggle, and GitHub). First, for CXR datasets associated with the CNN trained model from the beginning, whereby is comprised of four layers beginning with the Conv2D layer, which comprises 32 filters, followed by the MaxPooling and afterwards, we reiterated similarly. We used two techniques to avoid overgeneralization, the early stopping and the Dropout techniques. After all, the output was one neuron to classify both cases of 0 or 1, followed by a sigmoid function; in addition, we used the Adam optimizer owing to the more improved outcomes than what other optimizers conducted; ultimately, we referred to our findings by using a confusion matrix, classification report (Recall & Precision), sensitivity and specificity; in this approach, we achieved a classification accuracy of 96%. Our three integrated pre-trained models (VGG16, DenseNet201, and DenseNet121) yielded a remarkable test accuracy of 98.81%. Besides, our merged models (VGG16, DenseNet201) trained on CT images with the utmost effort; this model held an accurate test of 99.73% for binary classification with the (Normal/Covid-19) scenario. Comparing our results with related studies shows that our proposed models were superior to the previous CNN machine learning models in terms of various performance metrics. Our pre-trained model associated with the CT dataset achieved 100% of the F1score and the loss value was approximately 0.00268. The Author(s). Published by Elsevier Ltd. 2022 2022-07-08 /pmc/articles/PMC9263684/ /pubmed/35822170 http://dx.doi.org/10.1016/j.imu.2022.101004 Text en © 2022 The Author(s) Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Article
Hamwi, Wael Abdulsalam
Almustafa, Muhammad Mazen
Development and integration of VGG and dense transfer-learning systems supported with diverse lung images for discovery of the Coronavirus identity
title Development and integration of VGG and dense transfer-learning systems supported with diverse lung images for discovery of the Coronavirus identity
title_full Development and integration of VGG and dense transfer-learning systems supported with diverse lung images for discovery of the Coronavirus identity
title_fullStr Development and integration of VGG and dense transfer-learning systems supported with diverse lung images for discovery of the Coronavirus identity
title_full_unstemmed Development and integration of VGG and dense transfer-learning systems supported with diverse lung images for discovery of the Coronavirus identity
title_short Development and integration of VGG and dense transfer-learning systems supported with diverse lung images for discovery of the Coronavirus identity
title_sort development and integration of vgg and dense transfer-learning systems supported with diverse lung images for discovery of the coronavirus identity
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9263684/
https://www.ncbi.nlm.nih.gov/pubmed/35822170
http://dx.doi.org/10.1016/j.imu.2022.101004
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