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KDELR1 Is an Independent Prognostic Predictor and Correlates With Immunity in Glioma

BACKGROUND: Gliomas are the most malignant central nervous system tumors. With the development of sequencing technology, more potential biomarkers related to the treatment, prognosis, and molecular classification of glioma have been identified. Here, we intend to investigate the potential biological...

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Autores principales: Yuan, Yifan, Yang, Biao, Qi, Zengxin, Han, Zhenyuan, Cai, Jiajun, Song, Jianping
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9263977/
https://www.ncbi.nlm.nih.gov/pubmed/35814367
http://dx.doi.org/10.3389/fonc.2022.783721
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author Yuan, Yifan
Yang, Biao
Qi, Zengxin
Han, Zhenyuan
Cai, Jiajun
Song, Jianping
author_facet Yuan, Yifan
Yang, Biao
Qi, Zengxin
Han, Zhenyuan
Cai, Jiajun
Song, Jianping
author_sort Yuan, Yifan
collection PubMed
description BACKGROUND: Gliomas are the most malignant central nervous system tumors. With the development of sequencing technology, more potential biomarkers related to the treatment, prognosis, and molecular classification of glioma have been identified. Here, we intend to investigate the potential biological function and clinical value of a new biomarker in glioma. METHODS: KDELR1 expression data and the corresponding clinical information were downloaded from public databases and then preprocessed using R language. Correlation, Kaplan–Meier survival, and Cox regression analyses were performed to explore the clinical significance of KDELR1 in glioma patients. Furthermore, the immune infiltration and microenvironment parameters were evaluated via TIMER and CIBERSORT. Immunohistochemistry was conducted to confirm the KDELR1 expression and its correlation with immunity infiltration and prognosis. RESULTS: KDELR1 was upregulated in glioma samples compared with normal brain tissues, and its expression was significantly correlated with age, the World Health Organization (WHO) grade, recurrence, necrosis, microvascular proliferation, molecular classification, isocitrate dehydrogenase (IDH) mutation, and 1p/19q codeletion status. In addition, survival analysis showed that glioma patients with KDELR1 overexpression had shorter overall survival (OS) and disease-free survival times, and Cox regression analysis revealed that KDELR1 acted as an independent prognostic factor of OS in glioma patients. Gene set enrichment analysis indicated a significant enrichment of metabolism-associated pathways. KDELR1 expression was positively associated with immune infiltration (including infiltration by CD8+ T cells, CD4+ T cells, macrophages, and so on) and microenvironment parameters (including stromal, immune, and ESTIMATE scores) in gliomas. The expression of KDELR1 and its correlation with the tumor grade and prognosis were confirmed by immunohistochemistry in clinical samples (n = 119, P < 0.05). CONCLUSIONS: Taken together, these findings suggest that KDELR1 is correlated with the tumor grade, molecular classifications, and immune infiltration; highlighting that KDELR1 is a novel and promising biomarker for molecular classification, treatment, and prognostic assessment may further indicate the treating effect of immune therapy.
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spelling pubmed-92639772022-07-09 KDELR1 Is an Independent Prognostic Predictor and Correlates With Immunity in Glioma Yuan, Yifan Yang, Biao Qi, Zengxin Han, Zhenyuan Cai, Jiajun Song, Jianping Front Oncol Oncology BACKGROUND: Gliomas are the most malignant central nervous system tumors. With the development of sequencing technology, more potential biomarkers related to the treatment, prognosis, and molecular classification of glioma have been identified. Here, we intend to investigate the potential biological function and clinical value of a new biomarker in glioma. METHODS: KDELR1 expression data and the corresponding clinical information were downloaded from public databases and then preprocessed using R language. Correlation, Kaplan–Meier survival, and Cox regression analyses were performed to explore the clinical significance of KDELR1 in glioma patients. Furthermore, the immune infiltration and microenvironment parameters were evaluated via TIMER and CIBERSORT. Immunohistochemistry was conducted to confirm the KDELR1 expression and its correlation with immunity infiltration and prognosis. RESULTS: KDELR1 was upregulated in glioma samples compared with normal brain tissues, and its expression was significantly correlated with age, the World Health Organization (WHO) grade, recurrence, necrosis, microvascular proliferation, molecular classification, isocitrate dehydrogenase (IDH) mutation, and 1p/19q codeletion status. In addition, survival analysis showed that glioma patients with KDELR1 overexpression had shorter overall survival (OS) and disease-free survival times, and Cox regression analysis revealed that KDELR1 acted as an independent prognostic factor of OS in glioma patients. Gene set enrichment analysis indicated a significant enrichment of metabolism-associated pathways. KDELR1 expression was positively associated with immune infiltration (including infiltration by CD8+ T cells, CD4+ T cells, macrophages, and so on) and microenvironment parameters (including stromal, immune, and ESTIMATE scores) in gliomas. The expression of KDELR1 and its correlation with the tumor grade and prognosis were confirmed by immunohistochemistry in clinical samples (n = 119, P < 0.05). CONCLUSIONS: Taken together, these findings suggest that KDELR1 is correlated with the tumor grade, molecular classifications, and immune infiltration; highlighting that KDELR1 is a novel and promising biomarker for molecular classification, treatment, and prognostic assessment may further indicate the treating effect of immune therapy. Frontiers Media S.A. 2022-06-23 /pmc/articles/PMC9263977/ /pubmed/35814367 http://dx.doi.org/10.3389/fonc.2022.783721 Text en Copyright © 2022 Yuan, Yang, Qi, Han, Cai and Song https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Oncology
Yuan, Yifan
Yang, Biao
Qi, Zengxin
Han, Zhenyuan
Cai, Jiajun
Song, Jianping
KDELR1 Is an Independent Prognostic Predictor and Correlates With Immunity in Glioma
title KDELR1 Is an Independent Prognostic Predictor and Correlates With Immunity in Glioma
title_full KDELR1 Is an Independent Prognostic Predictor and Correlates With Immunity in Glioma
title_fullStr KDELR1 Is an Independent Prognostic Predictor and Correlates With Immunity in Glioma
title_full_unstemmed KDELR1 Is an Independent Prognostic Predictor and Correlates With Immunity in Glioma
title_short KDELR1 Is an Independent Prognostic Predictor and Correlates With Immunity in Glioma
title_sort kdelr1 is an independent prognostic predictor and correlates with immunity in glioma
topic Oncology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9263977/
https://www.ncbi.nlm.nih.gov/pubmed/35814367
http://dx.doi.org/10.3389/fonc.2022.783721
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