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Combining Molecular, Imaging, and Clinical Data Analysis for Predicting Cancer Prognosis
SIMPLE SUMMARY: The rise of Big Data, the widespread use of Machine Learning, and the cheapening of omics techniques have allowed for the creation of more sophisticated and accurate models in biomedical research. This article presents the state-of-the-art predictive models of cancer prognosis that u...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9265023/ https://www.ncbi.nlm.nih.gov/pubmed/35804988 http://dx.doi.org/10.3390/cancers14133215 |
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author | Lobato-Delgado, Barbara Priego-Torres, Blanca Sanchez-Morillo, Daniel |
author_facet | Lobato-Delgado, Barbara Priego-Torres, Blanca Sanchez-Morillo, Daniel |
author_sort | Lobato-Delgado, Barbara |
collection | PubMed |
description | SIMPLE SUMMARY: The rise of Big Data, the widespread use of Machine Learning, and the cheapening of omics techniques have allowed for the creation of more sophisticated and accurate models in biomedical research. This article presents the state-of-the-art predictive models of cancer prognosis that use multimodal data, considering clinical, molecular (omics and non-omics), and image data. The subject of study, the data modalities used, the data processing and modelling methods applied, the validation strategies involved, the integration strategies encompassed, and the evolution of prognostic predictive models are discussed. Finally, we discuss challenges and opportunities in this field of cancer research, with great potential impact on the clinical management of patients and, by extension, on the implementation of personalised and precision medicine. ABSTRACT: Cancer is one of the most detrimental diseases globally. Accordingly, the prognosis prediction of cancer patients has become a field of interest. In this review, we have gathered 43 state-of-the-art scientific papers published in the last 6 years that built cancer prognosis predictive models using multimodal data. We have defined the multimodality of data as four main types: clinical, anatomopathological, molecular, and medical imaging; and we have expanded on the information that each modality provides. The 43 studies were divided into three categories based on the modelling approach taken, and their characteristics were further discussed together with current issues and future trends. Research in this area has evolved from survival analysis through statistical modelling using mainly clinical and anatomopathological data to the prediction of cancer prognosis through a multi-faceted data-driven approach by the integration of complex, multimodal, and high-dimensional data containing multi-omics and medical imaging information and by applying Machine Learning and, more recently, Deep Learning techniques. This review concludes that cancer prognosis predictive multimodal models are capable of better stratifying patients, which can improve clinical management and contribute to the implementation of personalised medicine as well as provide new and valuable knowledge on cancer biology and its progression. |
format | Online Article Text |
id | pubmed-9265023 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-92650232022-07-09 Combining Molecular, Imaging, and Clinical Data Analysis for Predicting Cancer Prognosis Lobato-Delgado, Barbara Priego-Torres, Blanca Sanchez-Morillo, Daniel Cancers (Basel) Review SIMPLE SUMMARY: The rise of Big Data, the widespread use of Machine Learning, and the cheapening of omics techniques have allowed for the creation of more sophisticated and accurate models in biomedical research. This article presents the state-of-the-art predictive models of cancer prognosis that use multimodal data, considering clinical, molecular (omics and non-omics), and image data. The subject of study, the data modalities used, the data processing and modelling methods applied, the validation strategies involved, the integration strategies encompassed, and the evolution of prognostic predictive models are discussed. Finally, we discuss challenges and opportunities in this field of cancer research, with great potential impact on the clinical management of patients and, by extension, on the implementation of personalised and precision medicine. ABSTRACT: Cancer is one of the most detrimental diseases globally. Accordingly, the prognosis prediction of cancer patients has become a field of interest. In this review, we have gathered 43 state-of-the-art scientific papers published in the last 6 years that built cancer prognosis predictive models using multimodal data. We have defined the multimodality of data as four main types: clinical, anatomopathological, molecular, and medical imaging; and we have expanded on the information that each modality provides. The 43 studies were divided into three categories based on the modelling approach taken, and their characteristics were further discussed together with current issues and future trends. Research in this area has evolved from survival analysis through statistical modelling using mainly clinical and anatomopathological data to the prediction of cancer prognosis through a multi-faceted data-driven approach by the integration of complex, multimodal, and high-dimensional data containing multi-omics and medical imaging information and by applying Machine Learning and, more recently, Deep Learning techniques. This review concludes that cancer prognosis predictive multimodal models are capable of better stratifying patients, which can improve clinical management and contribute to the implementation of personalised medicine as well as provide new and valuable knowledge on cancer biology and its progression. MDPI 2022-06-30 /pmc/articles/PMC9265023/ /pubmed/35804988 http://dx.doi.org/10.3390/cancers14133215 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Review Lobato-Delgado, Barbara Priego-Torres, Blanca Sanchez-Morillo, Daniel Combining Molecular, Imaging, and Clinical Data Analysis for Predicting Cancer Prognosis |
title | Combining Molecular, Imaging, and Clinical Data Analysis for Predicting Cancer Prognosis |
title_full | Combining Molecular, Imaging, and Clinical Data Analysis for Predicting Cancer Prognosis |
title_fullStr | Combining Molecular, Imaging, and Clinical Data Analysis for Predicting Cancer Prognosis |
title_full_unstemmed | Combining Molecular, Imaging, and Clinical Data Analysis for Predicting Cancer Prognosis |
title_short | Combining Molecular, Imaging, and Clinical Data Analysis for Predicting Cancer Prognosis |
title_sort | combining molecular, imaging, and clinical data analysis for predicting cancer prognosis |
topic | Review |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9265023/ https://www.ncbi.nlm.nih.gov/pubmed/35804988 http://dx.doi.org/10.3390/cancers14133215 |
work_keys_str_mv | AT lobatodelgadobarbara combiningmolecularimagingandclinicaldataanalysisforpredictingcancerprognosis AT priegotorresblanca combiningmolecularimagingandclinicaldataanalysisforpredictingcancerprognosis AT sanchezmorillodaniel combiningmolecularimagingandclinicaldataanalysisforpredictingcancerprognosis |