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Digital PCR-Based Characterization of a g10evo-epsps Gene-Specific Matrix Reference Material for Its Food and Feed Detection

g10evo-epsps is a novel glyphosate herbicide-resistant gene that has been transferred to various crops such as soybean, corn, cotton, and rice. Here, we developed a gene-specific digital Polymerase Chain Reaction (dPCR) detection method for absolute quantitative analysis of g10evo-epsps, and charact...

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Autores principales: Chen, Xiaoyun, Yu, Huiru, Wang, Pengfei, Peng, Cheng, Wang, Xiaofu, Xu, Xiaoli, Xu, Junfeng, Liang, Jingang, Li, Liang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9266130/
https://www.ncbi.nlm.nih.gov/pubmed/35804704
http://dx.doi.org/10.3390/foods11131888
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author Chen, Xiaoyun
Yu, Huiru
Wang, Pengfei
Peng, Cheng
Wang, Xiaofu
Xu, Xiaoli
Xu, Junfeng
Liang, Jingang
Li, Liang
author_facet Chen, Xiaoyun
Yu, Huiru
Wang, Pengfei
Peng, Cheng
Wang, Xiaofu
Xu, Xiaoli
Xu, Junfeng
Liang, Jingang
Li, Liang
author_sort Chen, Xiaoyun
collection PubMed
description g10evo-epsps is a novel glyphosate herbicide-resistant gene that has been transferred to various crops such as soybean, corn, cotton, and rice. Here, we developed a gene-specific digital Polymerase Chain Reaction (dPCR) detection method for absolute quantitative analysis of g10evo-epsps, and characterized g10evo-epsps certified reference materials (CRM) using ZUTS-33 soybean powder as the candidate material. Stability tests of matrix CRMs demonstrate that these CRMs can be stored stably for 6 months and transported for 10 days at room temperature and withstand summer high temperatures (below 60 °C). CRM characterization is based on the copy number ratio of g10evo-epsps to lectin. Eight qualified laboratories independently validated the CRM using dPCR method, with a measurement of 0.98 (copy/copy) and an extended uncertainty of 0.08 (copy/copy). The g10evo-epsps matrix CRM described here may be used for qualitative and quantitative testing, method evaluation, laboratory quality control, and other related fields.
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spelling pubmed-92661302022-07-09 Digital PCR-Based Characterization of a g10evo-epsps Gene-Specific Matrix Reference Material for Its Food and Feed Detection Chen, Xiaoyun Yu, Huiru Wang, Pengfei Peng, Cheng Wang, Xiaofu Xu, Xiaoli Xu, Junfeng Liang, Jingang Li, Liang Foods Article g10evo-epsps is a novel glyphosate herbicide-resistant gene that has been transferred to various crops such as soybean, corn, cotton, and rice. Here, we developed a gene-specific digital Polymerase Chain Reaction (dPCR) detection method for absolute quantitative analysis of g10evo-epsps, and characterized g10evo-epsps certified reference materials (CRM) using ZUTS-33 soybean powder as the candidate material. Stability tests of matrix CRMs demonstrate that these CRMs can be stored stably for 6 months and transported for 10 days at room temperature and withstand summer high temperatures (below 60 °C). CRM characterization is based on the copy number ratio of g10evo-epsps to lectin. Eight qualified laboratories independently validated the CRM using dPCR method, with a measurement of 0.98 (copy/copy) and an extended uncertainty of 0.08 (copy/copy). The g10evo-epsps matrix CRM described here may be used for qualitative and quantitative testing, method evaluation, laboratory quality control, and other related fields. MDPI 2022-06-25 /pmc/articles/PMC9266130/ /pubmed/35804704 http://dx.doi.org/10.3390/foods11131888 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Chen, Xiaoyun
Yu, Huiru
Wang, Pengfei
Peng, Cheng
Wang, Xiaofu
Xu, Xiaoli
Xu, Junfeng
Liang, Jingang
Li, Liang
Digital PCR-Based Characterization of a g10evo-epsps Gene-Specific Matrix Reference Material for Its Food and Feed Detection
title Digital PCR-Based Characterization of a g10evo-epsps Gene-Specific Matrix Reference Material for Its Food and Feed Detection
title_full Digital PCR-Based Characterization of a g10evo-epsps Gene-Specific Matrix Reference Material for Its Food and Feed Detection
title_fullStr Digital PCR-Based Characterization of a g10evo-epsps Gene-Specific Matrix Reference Material for Its Food and Feed Detection
title_full_unstemmed Digital PCR-Based Characterization of a g10evo-epsps Gene-Specific Matrix Reference Material for Its Food and Feed Detection
title_short Digital PCR-Based Characterization of a g10evo-epsps Gene-Specific Matrix Reference Material for Its Food and Feed Detection
title_sort digital pcr-based characterization of a g10evo-epsps gene-specific matrix reference material for its food and feed detection
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9266130/
https://www.ncbi.nlm.nih.gov/pubmed/35804704
http://dx.doi.org/10.3390/foods11131888
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