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Genome-Wide Analysis of the Peptidase M24 Superfamily in Triticum aestivum Demonstrates That TaM24-9 Is Involved in Abiotic Stress Response

The peptidase M24 (Metallopeptidase 24, M24) superfamily is essential for plant growth, stress response, and pathogen defense. At present, there are few systematic reports on the identification and classification of members of the peptidase M24 proteins superfamily in wheat. In this work, we identif...

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Autores principales: Yan, Lu-Yu, Guo, Jia-Gui, Zhang, Xin, Liu, Yang, Xiong, Xin-Xin, Han, Yu-Xuan, Zhang, Li-Li, Zhang, Xiao-Hong, Min, Dong-Hong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9266489/
https://www.ncbi.nlm.nih.gov/pubmed/35805912
http://dx.doi.org/10.3390/ijms23136904
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author Yan, Lu-Yu
Guo, Jia-Gui
Zhang, Xin
Liu, Yang
Xiong, Xin-Xin
Han, Yu-Xuan
Zhang, Li-Li
Zhang, Xiao-Hong
Min, Dong-Hong
author_facet Yan, Lu-Yu
Guo, Jia-Gui
Zhang, Xin
Liu, Yang
Xiong, Xin-Xin
Han, Yu-Xuan
Zhang, Li-Li
Zhang, Xiao-Hong
Min, Dong-Hong
author_sort Yan, Lu-Yu
collection PubMed
description The peptidase M24 (Metallopeptidase 24, M24) superfamily is essential for plant growth, stress response, and pathogen defense. At present, there are few systematic reports on the identification and classification of members of the peptidase M24 proteins superfamily in wheat. In this work, we identified 53 putative candidate TaM24 genes. According to the protein sequences characteristics, these members can be roughly divided into three subfamilies: I, II, III. Most TaM24 genes are complex with multiple exons, and the motifs are relatively conserved in each sub-group. Through chromosome mapping analysis, we found that the 53 genes were unevenly distributed on 19 wheat chromosomes (except 3A and 3D), of which 68% were in triads. Analysis of gene duplication events showed that 62% of TaM24 genes in wheat came from fragment duplication events, and there were no tandem duplication events to amplify genes. Analysis of the promoter sequences of TaM24 genes revealed that cis-acting elements were rich in response elements to drought, osmotic stress, ABA, and MeJA. We also studied the expression of TaM24 in wheat tissues at developmental stages and abiotic stress. Then we selected TaM24-9 as the target for further analysis. The results showed that TaM24-9 genes strengthened the drought and salt tolerance of plants. Overall, our analysis showed that members of the peptidase M24 genes may participate in the abiotic stress response and provided potential gene resources for improving wheat resistance.
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spelling pubmed-92664892022-07-09 Genome-Wide Analysis of the Peptidase M24 Superfamily in Triticum aestivum Demonstrates That TaM24-9 Is Involved in Abiotic Stress Response Yan, Lu-Yu Guo, Jia-Gui Zhang, Xin Liu, Yang Xiong, Xin-Xin Han, Yu-Xuan Zhang, Li-Li Zhang, Xiao-Hong Min, Dong-Hong Int J Mol Sci Article The peptidase M24 (Metallopeptidase 24, M24) superfamily is essential for plant growth, stress response, and pathogen defense. At present, there are few systematic reports on the identification and classification of members of the peptidase M24 proteins superfamily in wheat. In this work, we identified 53 putative candidate TaM24 genes. According to the protein sequences characteristics, these members can be roughly divided into three subfamilies: I, II, III. Most TaM24 genes are complex with multiple exons, and the motifs are relatively conserved in each sub-group. Through chromosome mapping analysis, we found that the 53 genes were unevenly distributed on 19 wheat chromosomes (except 3A and 3D), of which 68% were in triads. Analysis of gene duplication events showed that 62% of TaM24 genes in wheat came from fragment duplication events, and there were no tandem duplication events to amplify genes. Analysis of the promoter sequences of TaM24 genes revealed that cis-acting elements were rich in response elements to drought, osmotic stress, ABA, and MeJA. We also studied the expression of TaM24 in wheat tissues at developmental stages and abiotic stress. Then we selected TaM24-9 as the target for further analysis. The results showed that TaM24-9 genes strengthened the drought and salt tolerance of plants. Overall, our analysis showed that members of the peptidase M24 genes may participate in the abiotic stress response and provided potential gene resources for improving wheat resistance. MDPI 2022-06-21 /pmc/articles/PMC9266489/ /pubmed/35805912 http://dx.doi.org/10.3390/ijms23136904 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Yan, Lu-Yu
Guo, Jia-Gui
Zhang, Xin
Liu, Yang
Xiong, Xin-Xin
Han, Yu-Xuan
Zhang, Li-Li
Zhang, Xiao-Hong
Min, Dong-Hong
Genome-Wide Analysis of the Peptidase M24 Superfamily in Triticum aestivum Demonstrates That TaM24-9 Is Involved in Abiotic Stress Response
title Genome-Wide Analysis of the Peptidase M24 Superfamily in Triticum aestivum Demonstrates That TaM24-9 Is Involved in Abiotic Stress Response
title_full Genome-Wide Analysis of the Peptidase M24 Superfamily in Triticum aestivum Demonstrates That TaM24-9 Is Involved in Abiotic Stress Response
title_fullStr Genome-Wide Analysis of the Peptidase M24 Superfamily in Triticum aestivum Demonstrates That TaM24-9 Is Involved in Abiotic Stress Response
title_full_unstemmed Genome-Wide Analysis of the Peptidase M24 Superfamily in Triticum aestivum Demonstrates That TaM24-9 Is Involved in Abiotic Stress Response
title_short Genome-Wide Analysis of the Peptidase M24 Superfamily in Triticum aestivum Demonstrates That TaM24-9 Is Involved in Abiotic Stress Response
title_sort genome-wide analysis of the peptidase m24 superfamily in triticum aestivum demonstrates that tam24-9 is involved in abiotic stress response
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9266489/
https://www.ncbi.nlm.nih.gov/pubmed/35805912
http://dx.doi.org/10.3390/ijms23136904
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