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Differential expression profile of plasma exosomal microRNAs in acute type A aortic dissection with acute lung injury
MicroRNAs (miRNAs) packaged into exosomes mediate cell communication and contribute to the pathogenesis of acute type A aortic dissection (ATAAD) with acute lung injury (ALI). The expression profile of plasma exosomal miRNAs in ATAAD patients with ALI hasn’t been identified. We performed a miRNA-seq...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Nature Publishing Group UK
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9270349/ https://www.ncbi.nlm.nih.gov/pubmed/35804020 http://dx.doi.org/10.1038/s41598-022-15859-3 |
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author | Zhang, Chiyuan Bai, Hui Zhang, Lei Zhang, Yanfeng Chen, Xuliang Shi, Ruizheng Zhang, Guogang Xu, Qian Lin, Guoqiang |
author_facet | Zhang, Chiyuan Bai, Hui Zhang, Lei Zhang, Yanfeng Chen, Xuliang Shi, Ruizheng Zhang, Guogang Xu, Qian Lin, Guoqiang |
author_sort | Zhang, Chiyuan |
collection | PubMed |
description | MicroRNAs (miRNAs) packaged into exosomes mediate cell communication and contribute to the pathogenesis of acute type A aortic dissection (ATAAD) with acute lung injury (ALI). The expression profile of plasma exosomal miRNAs in ATAAD patients with ALI hasn’t been identified. We performed a miRNA-sequencing to analyze the differentially expressed miRNAs (DE-miRNAs) of circulating exosomes in ATAAD patients with ALI compared to patients without ALI, founding 283 specific miRNAs in two groups. We respectively selected the top 10 downregulated and upregulated DE-miRNAs for further studies. The predicted transcription factors (TFs) of these DE-miRNAs were SMAD2, SRSF1, USF1, etc. The Gene Ontology (GO) and Kyoto Encyclopedia Genes and Genomes (KEGG) analysis predicted their target genes mainly involved acute inflammatory response, cell junction, cytoskeleton, NF-κB signaling pathway, etc. Construction and analysis of the PPI network revealed that RHOA and INSR were considered hub genes with the highest connectivity degrees. Moreover, we confirmed two exosomal miRNAs (hsa-miR-485-5p and hsa-miR-206) by real-time quantitative polymerase chain reaction (RT-qPCR) in a validation cohort. Our study identified a plasma exosomal miRNAs signature related to ATAAD with ALI. Certain DE-miRNAs may contribute to the progression of this disease, which help us better understand the pathogenesis of ATAAD with ALI. |
format | Online Article Text |
id | pubmed-9270349 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-92703492022-07-10 Differential expression profile of plasma exosomal microRNAs in acute type A aortic dissection with acute lung injury Zhang, Chiyuan Bai, Hui Zhang, Lei Zhang, Yanfeng Chen, Xuliang Shi, Ruizheng Zhang, Guogang Xu, Qian Lin, Guoqiang Sci Rep Article MicroRNAs (miRNAs) packaged into exosomes mediate cell communication and contribute to the pathogenesis of acute type A aortic dissection (ATAAD) with acute lung injury (ALI). The expression profile of plasma exosomal miRNAs in ATAAD patients with ALI hasn’t been identified. We performed a miRNA-sequencing to analyze the differentially expressed miRNAs (DE-miRNAs) of circulating exosomes in ATAAD patients with ALI compared to patients without ALI, founding 283 specific miRNAs in two groups. We respectively selected the top 10 downregulated and upregulated DE-miRNAs for further studies. The predicted transcription factors (TFs) of these DE-miRNAs were SMAD2, SRSF1, USF1, etc. The Gene Ontology (GO) and Kyoto Encyclopedia Genes and Genomes (KEGG) analysis predicted their target genes mainly involved acute inflammatory response, cell junction, cytoskeleton, NF-κB signaling pathway, etc. Construction and analysis of the PPI network revealed that RHOA and INSR were considered hub genes with the highest connectivity degrees. Moreover, we confirmed two exosomal miRNAs (hsa-miR-485-5p and hsa-miR-206) by real-time quantitative polymerase chain reaction (RT-qPCR) in a validation cohort. Our study identified a plasma exosomal miRNAs signature related to ATAAD with ALI. Certain DE-miRNAs may contribute to the progression of this disease, which help us better understand the pathogenesis of ATAAD with ALI. Nature Publishing Group UK 2022-07-08 /pmc/articles/PMC9270349/ /pubmed/35804020 http://dx.doi.org/10.1038/s41598-022-15859-3 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Zhang, Chiyuan Bai, Hui Zhang, Lei Zhang, Yanfeng Chen, Xuliang Shi, Ruizheng Zhang, Guogang Xu, Qian Lin, Guoqiang Differential expression profile of plasma exosomal microRNAs in acute type A aortic dissection with acute lung injury |
title | Differential expression profile of plasma exosomal microRNAs in acute type A aortic dissection with acute lung injury |
title_full | Differential expression profile of plasma exosomal microRNAs in acute type A aortic dissection with acute lung injury |
title_fullStr | Differential expression profile of plasma exosomal microRNAs in acute type A aortic dissection with acute lung injury |
title_full_unstemmed | Differential expression profile of plasma exosomal microRNAs in acute type A aortic dissection with acute lung injury |
title_short | Differential expression profile of plasma exosomal microRNAs in acute type A aortic dissection with acute lung injury |
title_sort | differential expression profile of plasma exosomal micrornas in acute type a aortic dissection with acute lung injury |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9270349/ https://www.ncbi.nlm.nih.gov/pubmed/35804020 http://dx.doi.org/10.1038/s41598-022-15859-3 |
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