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Crystal structure of potato 14-3-3 protein St14f revealed the importance of helix I in StFDL1 recognition

In potato (Solanum tuberosum L.), 14-3-3 protein forms a protein complex with the FLOWERING LOCUS T (FT)-like protein StSP6A and the FD-like protein StFDL1 to activate potato tuber formation. Eleven 14-3-3 isoforms were reported in potato, designated as St14a-k. In this study, the crystal structure...

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Autores principales: Harada, Ken-ichi, Furuita, Kyoko, Yamashita, Eiki, Taoka, Ken-ichiro, Tsuji, Hiroyuki, Fujiwara, Toshimichi, Nakagawa, Atsushi, Kojima, Chojiro
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9270373/
https://www.ncbi.nlm.nih.gov/pubmed/35804047
http://dx.doi.org/10.1038/s41598-022-15505-y
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author Harada, Ken-ichi
Furuita, Kyoko
Yamashita, Eiki
Taoka, Ken-ichiro
Tsuji, Hiroyuki
Fujiwara, Toshimichi
Nakagawa, Atsushi
Kojima, Chojiro
author_facet Harada, Ken-ichi
Furuita, Kyoko
Yamashita, Eiki
Taoka, Ken-ichiro
Tsuji, Hiroyuki
Fujiwara, Toshimichi
Nakagawa, Atsushi
Kojima, Chojiro
author_sort Harada, Ken-ichi
collection PubMed
description In potato (Solanum tuberosum L.), 14-3-3 protein forms a protein complex with the FLOWERING LOCUS T (FT)-like protein StSP6A and the FD-like protein StFDL1 to activate potato tuber formation. Eleven 14-3-3 isoforms were reported in potato, designated as St14a-k. In this study, the crystal structure of the free form of St14f was determined at 2.5 Å resolution. Three chains were included in the asymmetric unit of the St14f free form crystal, and the structural deviation among the three chain structures was found on the C-terminal helix H and I. The St14f free form structure in solution was also investigated by nuclear magnetic resonance (NMR) residual dipolar coupling analysis, and the chain B in the crystal structure was consistent with NMR data. Compared to other crystal structures, St14f helix I exhibited a different conformation with larger B-factor values. Larger B-factor values on helix I were also found in the 14-3-3 free form structure with higher solvent contents. The mutation in St14f Helix I stabilized the complex with StFDL1. These data clearly showed that the flexibility of helix I of 14-3-3 protein plays an important role in the recognition of target protein.
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spelling pubmed-92703732022-07-10 Crystal structure of potato 14-3-3 protein St14f revealed the importance of helix I in StFDL1 recognition Harada, Ken-ichi Furuita, Kyoko Yamashita, Eiki Taoka, Ken-ichiro Tsuji, Hiroyuki Fujiwara, Toshimichi Nakagawa, Atsushi Kojima, Chojiro Sci Rep Article In potato (Solanum tuberosum L.), 14-3-3 protein forms a protein complex with the FLOWERING LOCUS T (FT)-like protein StSP6A and the FD-like protein StFDL1 to activate potato tuber formation. Eleven 14-3-3 isoforms were reported in potato, designated as St14a-k. In this study, the crystal structure of the free form of St14f was determined at 2.5 Å resolution. Three chains were included in the asymmetric unit of the St14f free form crystal, and the structural deviation among the three chain structures was found on the C-terminal helix H and I. The St14f free form structure in solution was also investigated by nuclear magnetic resonance (NMR) residual dipolar coupling analysis, and the chain B in the crystal structure was consistent with NMR data. Compared to other crystal structures, St14f helix I exhibited a different conformation with larger B-factor values. Larger B-factor values on helix I were also found in the 14-3-3 free form structure with higher solvent contents. The mutation in St14f Helix I stabilized the complex with StFDL1. These data clearly showed that the flexibility of helix I of 14-3-3 protein plays an important role in the recognition of target protein. Nature Publishing Group UK 2022-07-08 /pmc/articles/PMC9270373/ /pubmed/35804047 http://dx.doi.org/10.1038/s41598-022-15505-y Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Harada, Ken-ichi
Furuita, Kyoko
Yamashita, Eiki
Taoka, Ken-ichiro
Tsuji, Hiroyuki
Fujiwara, Toshimichi
Nakagawa, Atsushi
Kojima, Chojiro
Crystal structure of potato 14-3-3 protein St14f revealed the importance of helix I in StFDL1 recognition
title Crystal structure of potato 14-3-3 protein St14f revealed the importance of helix I in StFDL1 recognition
title_full Crystal structure of potato 14-3-3 protein St14f revealed the importance of helix I in StFDL1 recognition
title_fullStr Crystal structure of potato 14-3-3 protein St14f revealed the importance of helix I in StFDL1 recognition
title_full_unstemmed Crystal structure of potato 14-3-3 protein St14f revealed the importance of helix I in StFDL1 recognition
title_short Crystal structure of potato 14-3-3 protein St14f revealed the importance of helix I in StFDL1 recognition
title_sort crystal structure of potato 14-3-3 protein st14f revealed the importance of helix i in stfdl1 recognition
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9270373/
https://www.ncbi.nlm.nih.gov/pubmed/35804047
http://dx.doi.org/10.1038/s41598-022-15505-y
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