Cargando…

Signal-processing and adaptive prototissue formation in metabolic DNA protocells

The fundamental life-defining processes in living cells, such as replication, division, adaptation, and tissue formation, occur via intertwined metabolic reaction networks that process signals for downstream effects with high precision in a confined, crowded environment. Hence, it is crucial to unde...

Descripción completa

Detalles Bibliográficos
Autores principales: Samanta, Avik, Hörner, Maximilian, Liu, Wei, Weber, Wilfried, Walther, Andreas
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9270428/
https://www.ncbi.nlm.nih.gov/pubmed/35803944
http://dx.doi.org/10.1038/s41467-022-31632-6
_version_ 1784744466791268352
author Samanta, Avik
Hörner, Maximilian
Liu, Wei
Weber, Wilfried
Walther, Andreas
author_facet Samanta, Avik
Hörner, Maximilian
Liu, Wei
Weber, Wilfried
Walther, Andreas
author_sort Samanta, Avik
collection PubMed
description The fundamental life-defining processes in living cells, such as replication, division, adaptation, and tissue formation, occur via intertwined metabolic reaction networks that process signals for downstream effects with high precision in a confined, crowded environment. Hence, it is crucial to understand and reenact some of these functions in wholly synthetic cell-like entities (protocells) to envision designing soft materials with life-like traits. Herein, we report on all-DNA protocells composed of a liquid DNA interior and a hydrogel-like shell, harboring a catalytically active DNAzyme, that converts DNA signals into functional metabolites that lead to downstream adaptation processes via site-selective strand displacement reactions. The downstream processes include intra-protocellular phenotype-like changes, prototissue formation via multivalent interactions, and chemical messenger communication between active sender and dormant receiver cell populations for sorted heteroprototissue formation. The approach integrates several tools of DNA-nanoscience in a synchronized way to mimic life-like behavior in artificial systems for future interactive materials.
format Online
Article
Text
id pubmed-9270428
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher Nature Publishing Group UK
record_format MEDLINE/PubMed
spelling pubmed-92704282022-07-10 Signal-processing and adaptive prototissue formation in metabolic DNA protocells Samanta, Avik Hörner, Maximilian Liu, Wei Weber, Wilfried Walther, Andreas Nat Commun Article The fundamental life-defining processes in living cells, such as replication, division, adaptation, and tissue formation, occur via intertwined metabolic reaction networks that process signals for downstream effects with high precision in a confined, crowded environment. Hence, it is crucial to understand and reenact some of these functions in wholly synthetic cell-like entities (protocells) to envision designing soft materials with life-like traits. Herein, we report on all-DNA protocells composed of a liquid DNA interior and a hydrogel-like shell, harboring a catalytically active DNAzyme, that converts DNA signals into functional metabolites that lead to downstream adaptation processes via site-selective strand displacement reactions. The downstream processes include intra-protocellular phenotype-like changes, prototissue formation via multivalent interactions, and chemical messenger communication between active sender and dormant receiver cell populations for sorted heteroprototissue formation. The approach integrates several tools of DNA-nanoscience in a synchronized way to mimic life-like behavior in artificial systems for future interactive materials. Nature Publishing Group UK 2022-07-08 /pmc/articles/PMC9270428/ /pubmed/35803944 http://dx.doi.org/10.1038/s41467-022-31632-6 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Samanta, Avik
Hörner, Maximilian
Liu, Wei
Weber, Wilfried
Walther, Andreas
Signal-processing and adaptive prototissue formation in metabolic DNA protocells
title Signal-processing and adaptive prototissue formation in metabolic DNA protocells
title_full Signal-processing and adaptive prototissue formation in metabolic DNA protocells
title_fullStr Signal-processing and adaptive prototissue formation in metabolic DNA protocells
title_full_unstemmed Signal-processing and adaptive prototissue formation in metabolic DNA protocells
title_short Signal-processing and adaptive prototissue formation in metabolic DNA protocells
title_sort signal-processing and adaptive prototissue formation in metabolic dna protocells
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9270428/
https://www.ncbi.nlm.nih.gov/pubmed/35803944
http://dx.doi.org/10.1038/s41467-022-31632-6
work_keys_str_mv AT samantaavik signalprocessingandadaptiveprototissueformationinmetabolicdnaprotocells
AT hornermaximilian signalprocessingandadaptiveprototissueformationinmetabolicdnaprotocells
AT liuwei signalprocessingandadaptiveprototissueformationinmetabolicdnaprotocells
AT weberwilfried signalprocessingandadaptiveprototissueformationinmetabolicdnaprotocells
AT waltherandreas signalprocessingandadaptiveprototissueformationinmetabolicdnaprotocells