Cargando…
Nanotube abundance from non-negative matrix factorization of Raman spectra as an example of chemical purity from open source machine learning
The chemical purity of materials is important for semiconductors, including the carbon nanotube material system, which is emerging in semiconductor applications. One approach to get statistically meaningful abundances and/or concentrations is to measure a large number of small samples. Automated mul...
Autores principales: | , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9270454/ https://www.ncbi.nlm.nih.gov/pubmed/35803993 http://dx.doi.org/10.1038/s41598-022-15359-4 |
_version_ | 1784744473210650624 |
---|---|
author | Flores, Elijah Ouyang, Jianying Lapointe, François Finnie, Paul |
author_facet | Flores, Elijah Ouyang, Jianying Lapointe, François Finnie, Paul |
author_sort | Flores, Elijah |
collection | PubMed |
description | The chemical purity of materials is important for semiconductors, including the carbon nanotube material system, which is emerging in semiconductor applications. One approach to get statistically meaningful abundances and/or concentrations is to measure a large number of small samples. Automated multivariate classification algorithms can be used to draw conclusions from such large data sets. Here, we use spatially-mapped Raman spectra of mixtures of chirality-sorted single walled carbon nanotubes dispersed sparsely on flat silicon/silicon oxide substrates. We use non-negative matrix factorization (NMF) decomposition in scikit-learn, an open-source, python language “machine learning” package, to extract spectral components and derive weighting factors. We extract the abundance of minority species (7,5) nanotubes in mixtures by testing both synthetic data, and real samples prepared by dilution. We show how noise limits the purity level that can be evaluated. We determine real situations where this approach works well, and identify situations where it fails. |
format | Online Article Text |
id | pubmed-9270454 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-92704542022-07-10 Nanotube abundance from non-negative matrix factorization of Raman spectra as an example of chemical purity from open source machine learning Flores, Elijah Ouyang, Jianying Lapointe, François Finnie, Paul Sci Rep Article The chemical purity of materials is important for semiconductors, including the carbon nanotube material system, which is emerging in semiconductor applications. One approach to get statistically meaningful abundances and/or concentrations is to measure a large number of small samples. Automated multivariate classification algorithms can be used to draw conclusions from such large data sets. Here, we use spatially-mapped Raman spectra of mixtures of chirality-sorted single walled carbon nanotubes dispersed sparsely on flat silicon/silicon oxide substrates. We use non-negative matrix factorization (NMF) decomposition in scikit-learn, an open-source, python language “machine learning” package, to extract spectral components and derive weighting factors. We extract the abundance of minority species (7,5) nanotubes in mixtures by testing both synthetic data, and real samples prepared by dilution. We show how noise limits the purity level that can be evaluated. We determine real situations where this approach works well, and identify situations where it fails. Nature Publishing Group UK 2022-07-08 /pmc/articles/PMC9270454/ /pubmed/35803993 http://dx.doi.org/10.1038/s41598-022-15359-4 Text en © Crown 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Flores, Elijah Ouyang, Jianying Lapointe, François Finnie, Paul Nanotube abundance from non-negative matrix factorization of Raman spectra as an example of chemical purity from open source machine learning |
title | Nanotube abundance from non-negative matrix factorization of Raman spectra as an example of chemical purity from open source machine learning |
title_full | Nanotube abundance from non-negative matrix factorization of Raman spectra as an example of chemical purity from open source machine learning |
title_fullStr | Nanotube abundance from non-negative matrix factorization of Raman spectra as an example of chemical purity from open source machine learning |
title_full_unstemmed | Nanotube abundance from non-negative matrix factorization of Raman spectra as an example of chemical purity from open source machine learning |
title_short | Nanotube abundance from non-negative matrix factorization of Raman spectra as an example of chemical purity from open source machine learning |
title_sort | nanotube abundance from non-negative matrix factorization of raman spectra as an example of chemical purity from open source machine learning |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9270454/ https://www.ncbi.nlm.nih.gov/pubmed/35803993 http://dx.doi.org/10.1038/s41598-022-15359-4 |
work_keys_str_mv | AT floreselijah nanotubeabundancefromnonnegativematrixfactorizationoframanspectraasanexampleofchemicalpurityfromopensourcemachinelearning AT ouyangjianying nanotubeabundancefromnonnegativematrixfactorizationoframanspectraasanexampleofchemicalpurityfromopensourcemachinelearning AT lapointefrancois nanotubeabundancefromnonnegativematrixfactorizationoframanspectraasanexampleofchemicalpurityfromopensourcemachinelearning AT finniepaul nanotubeabundancefromnonnegativematrixfactorizationoframanspectraasanexampleofchemicalpurityfromopensourcemachinelearning |