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Ultra-high resolution, multi-scale, context-aware approach for detection of small cancers on mammography

While detection of malignancies on mammography has received a boost with the use of Convolutional Neural Networks (CNN), detection of cancers of very small size remains challenging. This is however clinically significant as the purpose of mammography is early detection of cancer, making it imperativ...

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Autores principales: Rangarajan, Krithika, Gupta, Aman, Dasgupta, Saptarshi, Marri, Uday, Gupta, Arun Kumar, Hari, Smriti, Banerjee, Subhashis, Arora, Chetan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9270480/
https://www.ncbi.nlm.nih.gov/pubmed/35803985
http://dx.doi.org/10.1038/s41598-022-15259-7
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author Rangarajan, Krithika
Gupta, Aman
Dasgupta, Saptarshi
Marri, Uday
Gupta, Arun Kumar
Hari, Smriti
Banerjee, Subhashis
Arora, Chetan
author_facet Rangarajan, Krithika
Gupta, Aman
Dasgupta, Saptarshi
Marri, Uday
Gupta, Arun Kumar
Hari, Smriti
Banerjee, Subhashis
Arora, Chetan
author_sort Rangarajan, Krithika
collection PubMed
description While detection of malignancies on mammography has received a boost with the use of Convolutional Neural Networks (CNN), detection of cancers of very small size remains challenging. This is however clinically significant as the purpose of mammography is early detection of cancer, making it imperative to pick them up when they are still very small. Mammography has the highest spatial resolution (image sizes as high as 3328 × 4096 pixels) out of all imaging modalities, a requirement that stems from the need to detect fine features of the smallest cancers on screening. However due to computational constraints, most state of the art CNNs work on reduced resolution images. Those that work on higher resolutions, compromise on global context and work at single scale. In this work, we show that resolution, scale and image-context are all important independent factors in detection of small masses. We thereby use a fully convolutional network, with the ability to take any input size. In addition, we incorporate a systematic multi-scale, multi-resolution approach, and encode image context, which we show are critical factors to detection of small masses. We show that this approach improves the detection of cancer, particularly for small masses in comparison to the baseline model. We perform a single institution multicentre study, and show the performance of the model on a diagnostic mammography dataset, a screening mammography dataset, as well as a curated dataset of small cancers < 1 cm in size. We show that our approach improves the sensitivity from 61.53 to 87.18% at 0.3 False Positives per Image (FPI) on this small cancer dataset. Model and code are available from https://github.com/amangupt01/Small_Cancer_Detection
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spelling pubmed-92704802022-07-10 Ultra-high resolution, multi-scale, context-aware approach for detection of small cancers on mammography Rangarajan, Krithika Gupta, Aman Dasgupta, Saptarshi Marri, Uday Gupta, Arun Kumar Hari, Smriti Banerjee, Subhashis Arora, Chetan Sci Rep Article While detection of malignancies on mammography has received a boost with the use of Convolutional Neural Networks (CNN), detection of cancers of very small size remains challenging. This is however clinically significant as the purpose of mammography is early detection of cancer, making it imperative to pick them up when they are still very small. Mammography has the highest spatial resolution (image sizes as high as 3328 × 4096 pixels) out of all imaging modalities, a requirement that stems from the need to detect fine features of the smallest cancers on screening. However due to computational constraints, most state of the art CNNs work on reduced resolution images. Those that work on higher resolutions, compromise on global context and work at single scale. In this work, we show that resolution, scale and image-context are all important independent factors in detection of small masses. We thereby use a fully convolutional network, with the ability to take any input size. In addition, we incorporate a systematic multi-scale, multi-resolution approach, and encode image context, which we show are critical factors to detection of small masses. We show that this approach improves the detection of cancer, particularly for small masses in comparison to the baseline model. We perform a single institution multicentre study, and show the performance of the model on a diagnostic mammography dataset, a screening mammography dataset, as well as a curated dataset of small cancers < 1 cm in size. We show that our approach improves the sensitivity from 61.53 to 87.18% at 0.3 False Positives per Image (FPI) on this small cancer dataset. Model and code are available from https://github.com/amangupt01/Small_Cancer_Detection Nature Publishing Group UK 2022-07-08 /pmc/articles/PMC9270480/ /pubmed/35803985 http://dx.doi.org/10.1038/s41598-022-15259-7 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Rangarajan, Krithika
Gupta, Aman
Dasgupta, Saptarshi
Marri, Uday
Gupta, Arun Kumar
Hari, Smriti
Banerjee, Subhashis
Arora, Chetan
Ultra-high resolution, multi-scale, context-aware approach for detection of small cancers on mammography
title Ultra-high resolution, multi-scale, context-aware approach for detection of small cancers on mammography
title_full Ultra-high resolution, multi-scale, context-aware approach for detection of small cancers on mammography
title_fullStr Ultra-high resolution, multi-scale, context-aware approach for detection of small cancers on mammography
title_full_unstemmed Ultra-high resolution, multi-scale, context-aware approach for detection of small cancers on mammography
title_short Ultra-high resolution, multi-scale, context-aware approach for detection of small cancers on mammography
title_sort ultra-high resolution, multi-scale, context-aware approach for detection of small cancers on mammography
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9270480/
https://www.ncbi.nlm.nih.gov/pubmed/35803985
http://dx.doi.org/10.1038/s41598-022-15259-7
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