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Elevated RECQL1 expression predicts poor prognosis and associates with tumor immune infiltration in low-grade glioma
BACKGROUND: Dysregulation of RecQ protein-like 1 (RECQL1), a member of the RecQ DNA helicase, has been determined to participate in malignant process of numerous tumors such as immunosuppression and proliferation and may serve as a biomarker for certain malignancies. Nevertheless, whether there is a...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
AME Publishing Company
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9273661/ https://www.ncbi.nlm.nih.gov/pubmed/35836526 http://dx.doi.org/10.21037/tcr-21-2762 |
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author | Wang, Guiyuan Cen, Yulin Wang, Celi Xiang, Wei Li, Shenjie Ming, Yang Chen, Ligang Zhou, Jie |
author_facet | Wang, Guiyuan Cen, Yulin Wang, Celi Xiang, Wei Li, Shenjie Ming, Yang Chen, Ligang Zhou, Jie |
author_sort | Wang, Guiyuan |
collection | PubMed |
description | BACKGROUND: Dysregulation of RecQ protein-like 1 (RECQL1), a member of the RecQ DNA helicase, has been determined to participate in malignant process of numerous tumors such as immunosuppression and proliferation and may serve as a biomarker for certain malignancies. Nevertheless, whether there is a similar association between RECQL1 and low-grade glioma (LGG) is uncertain. We therefore turned our attention to exploring the association of RECQL1 with tumor immune infiltration and prognostic significance in LGG. METHODS: The differential expression analysis of the RecQ DNA helicases was conducted through the GLIOVIS database and GSE4290 dataset, and verified by the Gene Expression Profiling Interactive Analysis 2 database. Kaplan-Meier plots, Univariate and multivariate Cox regression analysis were employed to assess the prognostic value of RECQL1 expression level and other six variables in LGG patients, and subsequently an efficient nomogram model was generated for clinical prediction. Tumor Immune Estimation Resource database and the single sample Gene Set Enrichment Analysis were used to assess the correlation between RECQL1 and immune infiltration of LGG. The biological processes that may be related to RECQL1 in LGG were learned through functional enrichment analysis by Gene Set Enrichment Analysis software. RESULTS: Among the five RecQ DNA helicases detected, only RECQL1 was over-expression in LGG with the most convincing evidence (log2FoldChange >1.5, q value <0.01). High RECQL1 expression demonstrated worse overall survival and progression-free survival of LGG patients (P<0.05). Dysregulation of RECQL1 was an independent prognostic indicator for outcomes of LGG (HR >1.4, P<0.05). RECQL1 may participates in the carcinogenic pathways of LGG such as adherens junction and JAK-STAT signaling pathways. The transcription expression level of RECQL1, was obviously associated with tumor immune infiltrating cells and their marker genes. CONCLUSIONS: High RECQL1 expression detected in LGG not only implies adverse clinical outcome of patients, but also correlates with tumor immune infiltration and certain oncogenic pathways. Our study proposes potential novel biomarker and therapeutic target for the treatment of LGG patients. |
format | Online Article Text |
id | pubmed-9273661 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | AME Publishing Company |
record_format | MEDLINE/PubMed |
spelling | pubmed-92736612022-07-13 Elevated RECQL1 expression predicts poor prognosis and associates with tumor immune infiltration in low-grade glioma Wang, Guiyuan Cen, Yulin Wang, Celi Xiang, Wei Li, Shenjie Ming, Yang Chen, Ligang Zhou, Jie Transl Cancer Res Original Article BACKGROUND: Dysregulation of RecQ protein-like 1 (RECQL1), a member of the RecQ DNA helicase, has been determined to participate in malignant process of numerous tumors such as immunosuppression and proliferation and may serve as a biomarker for certain malignancies. Nevertheless, whether there is a similar association between RECQL1 and low-grade glioma (LGG) is uncertain. We therefore turned our attention to exploring the association of RECQL1 with tumor immune infiltration and prognostic significance in LGG. METHODS: The differential expression analysis of the RecQ DNA helicases was conducted through the GLIOVIS database and GSE4290 dataset, and verified by the Gene Expression Profiling Interactive Analysis 2 database. Kaplan-Meier plots, Univariate and multivariate Cox regression analysis were employed to assess the prognostic value of RECQL1 expression level and other six variables in LGG patients, and subsequently an efficient nomogram model was generated for clinical prediction. Tumor Immune Estimation Resource database and the single sample Gene Set Enrichment Analysis were used to assess the correlation between RECQL1 and immune infiltration of LGG. The biological processes that may be related to RECQL1 in LGG were learned through functional enrichment analysis by Gene Set Enrichment Analysis software. RESULTS: Among the five RecQ DNA helicases detected, only RECQL1 was over-expression in LGG with the most convincing evidence (log2FoldChange >1.5, q value <0.01). High RECQL1 expression demonstrated worse overall survival and progression-free survival of LGG patients (P<0.05). Dysregulation of RECQL1 was an independent prognostic indicator for outcomes of LGG (HR >1.4, P<0.05). RECQL1 may participates in the carcinogenic pathways of LGG such as adherens junction and JAK-STAT signaling pathways. The transcription expression level of RECQL1, was obviously associated with tumor immune infiltrating cells and their marker genes. CONCLUSIONS: High RECQL1 expression detected in LGG not only implies adverse clinical outcome of patients, but also correlates with tumor immune infiltration and certain oncogenic pathways. Our study proposes potential novel biomarker and therapeutic target for the treatment of LGG patients. AME Publishing Company 2022-06 /pmc/articles/PMC9273661/ /pubmed/35836526 http://dx.doi.org/10.21037/tcr-21-2762 Text en 2022 Translational Cancer Research. All rights reserved. https://creativecommons.org/licenses/by-nc-nd/4.0/Open Access Statement: This is an Open Access article distributed in accordance with the Creative Commons Attribution-NonCommercial-NoDerivs 4.0 International License (CC BY-NC-ND 4.0), which permits the non-commercial replication and distribution of the article with the strict proviso that no changes or edits are made and the original work is properly cited (including links to both the formal publication through the relevant DOI and the license). See: https://creativecommons.org/licenses/by-nc-nd/4.0/. |
spellingShingle | Original Article Wang, Guiyuan Cen, Yulin Wang, Celi Xiang, Wei Li, Shenjie Ming, Yang Chen, Ligang Zhou, Jie Elevated RECQL1 expression predicts poor prognosis and associates with tumor immune infiltration in low-grade glioma |
title | Elevated RECQL1 expression predicts poor prognosis and associates with tumor immune infiltration in low-grade glioma |
title_full | Elevated RECQL1 expression predicts poor prognosis and associates with tumor immune infiltration in low-grade glioma |
title_fullStr | Elevated RECQL1 expression predicts poor prognosis and associates with tumor immune infiltration in low-grade glioma |
title_full_unstemmed | Elevated RECQL1 expression predicts poor prognosis and associates with tumor immune infiltration in low-grade glioma |
title_short | Elevated RECQL1 expression predicts poor prognosis and associates with tumor immune infiltration in low-grade glioma |
title_sort | elevated recql1 expression predicts poor prognosis and associates with tumor immune infiltration in low-grade glioma |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9273661/ https://www.ncbi.nlm.nih.gov/pubmed/35836526 http://dx.doi.org/10.21037/tcr-21-2762 |
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