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Prediction of Lumbar Drainage-Related Meningitis Based on Supervised Machine Learning Algorithms
BACKGROUND: Lumbar drainage is widely used in the clinic; however, forecasting lumbar drainage-related meningitis (LDRM) is limited. We aimed to establish prediction models using supervised machine learning (ML) algorithms. METHODS: We utilized a cohort of 273 eligible lumbar drainage cases. Data we...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9273930/ https://www.ncbi.nlm.nih.gov/pubmed/35836985 http://dx.doi.org/10.3389/fpubh.2022.910479 |
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author | Wang, Peng Cheng, Shuwen Li, Yaxin Liu, Li Liu, Jia Zhao, Qiang Luo, Shuang |
author_facet | Wang, Peng Cheng, Shuwen Li, Yaxin Liu, Li Liu, Jia Zhao, Qiang Luo, Shuang |
author_sort | Wang, Peng |
collection | PubMed |
description | BACKGROUND: Lumbar drainage is widely used in the clinic; however, forecasting lumbar drainage-related meningitis (LDRM) is limited. We aimed to establish prediction models using supervised machine learning (ML) algorithms. METHODS: We utilized a cohort of 273 eligible lumbar drainage cases. Data were preprocessed and split into training and testing sets. Optimal hyper-parameters were archived by 10-fold cross-validation and grid search. The support vector machine (SVM), random forest (RF), and artificial neural network (ANN) were adopted for model training. The area under the operating characteristic curve (AUROC) and precision-recall curve (AUPRC), true positive ratio (TPR), true negative ratio (TNR), specificity, sensitivity, accuracy, and kappa coefficient were used for model evaluation. All trained models were internally validated. The importance of features was also analyzed. RESULTS: In the training set, all the models had AUROC exceeding 0.8. SVM and the RF models had an AUPRC of more than 0.6, but the ANN model had an unexpectedly low AUPRC (0.380). The RF and ANN models revealed similar TPR, whereas the ANN model had a higher TNR and demonstrated better specificity, sensitivity, accuracy, and kappa efficiency. In the testing set, most performance indicators of established models decreased. However, the RF and AVM models maintained adequate AUROC (0.828 vs. 0.719) and AUPRC (0.413 vs. 0.520), and the RF model also had better TPR, specificity, sensitivity, accuracy, and kappa efficiency. Site leakage showed the most considerable mean decrease in accuracy. CONCLUSIONS: The RF and SVM models could predict LDRM, in which the RF model owned the best performance, and site leakage was the most meaningful predictor. |
format | Online Article Text |
id | pubmed-9273930 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-92739302022-07-13 Prediction of Lumbar Drainage-Related Meningitis Based on Supervised Machine Learning Algorithms Wang, Peng Cheng, Shuwen Li, Yaxin Liu, Li Liu, Jia Zhao, Qiang Luo, Shuang Front Public Health Public Health BACKGROUND: Lumbar drainage is widely used in the clinic; however, forecasting lumbar drainage-related meningitis (LDRM) is limited. We aimed to establish prediction models using supervised machine learning (ML) algorithms. METHODS: We utilized a cohort of 273 eligible lumbar drainage cases. Data were preprocessed and split into training and testing sets. Optimal hyper-parameters were archived by 10-fold cross-validation and grid search. The support vector machine (SVM), random forest (RF), and artificial neural network (ANN) were adopted for model training. The area under the operating characteristic curve (AUROC) and precision-recall curve (AUPRC), true positive ratio (TPR), true negative ratio (TNR), specificity, sensitivity, accuracy, and kappa coefficient were used for model evaluation. All trained models were internally validated. The importance of features was also analyzed. RESULTS: In the training set, all the models had AUROC exceeding 0.8. SVM and the RF models had an AUPRC of more than 0.6, but the ANN model had an unexpectedly low AUPRC (0.380). The RF and ANN models revealed similar TPR, whereas the ANN model had a higher TNR and demonstrated better specificity, sensitivity, accuracy, and kappa efficiency. In the testing set, most performance indicators of established models decreased. However, the RF and AVM models maintained adequate AUROC (0.828 vs. 0.719) and AUPRC (0.413 vs. 0.520), and the RF model also had better TPR, specificity, sensitivity, accuracy, and kappa efficiency. Site leakage showed the most considerable mean decrease in accuracy. CONCLUSIONS: The RF and SVM models could predict LDRM, in which the RF model owned the best performance, and site leakage was the most meaningful predictor. Frontiers Media S.A. 2022-06-28 /pmc/articles/PMC9273930/ /pubmed/35836985 http://dx.doi.org/10.3389/fpubh.2022.910479 Text en Copyright © 2022 Wang, Cheng, Li, Liu, Liu, Zhao and Luo. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Public Health Wang, Peng Cheng, Shuwen Li, Yaxin Liu, Li Liu, Jia Zhao, Qiang Luo, Shuang Prediction of Lumbar Drainage-Related Meningitis Based on Supervised Machine Learning Algorithms |
title | Prediction of Lumbar Drainage-Related Meningitis Based on Supervised Machine Learning Algorithms |
title_full | Prediction of Lumbar Drainage-Related Meningitis Based on Supervised Machine Learning Algorithms |
title_fullStr | Prediction of Lumbar Drainage-Related Meningitis Based on Supervised Machine Learning Algorithms |
title_full_unstemmed | Prediction of Lumbar Drainage-Related Meningitis Based on Supervised Machine Learning Algorithms |
title_short | Prediction of Lumbar Drainage-Related Meningitis Based on Supervised Machine Learning Algorithms |
title_sort | prediction of lumbar drainage-related meningitis based on supervised machine learning algorithms |
topic | Public Health |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9273930/ https://www.ncbi.nlm.nih.gov/pubmed/35836985 http://dx.doi.org/10.3389/fpubh.2022.910479 |
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