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Novel Functional eQTL-SNPs Associated With Susceptibility to Mycoplasma pneumoniae Pneumonia in Children

BACKGROUND: The functional causal single-nucleotide polymorphisms (SNPs) associated with susceptibility to Mycoplasma pneumoniae Pneumonia (MPP) have scarcely been identified. In this study, we aimed to analyze the association between the functional expression quantitative trait locus (eQTL)-SNPs an...

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Autores principales: Dong, Yang, Gao, Yanmin, Luo, Cheng, Wu, Nengshun, Cheng, Zhounan, Qiu, Anni, Zhou, Yan, Zhang, Wendi, Chu, Minjie, Chang, Qing
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9273990/
https://www.ncbi.nlm.nih.gov/pubmed/35836993
http://dx.doi.org/10.3389/fpubh.2022.899045
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author Dong, Yang
Gao, Yanmin
Luo, Cheng
Wu, Nengshun
Cheng, Zhounan
Qiu, Anni
Zhou, Yan
Zhang, Wendi
Chu, Minjie
Chang, Qing
author_facet Dong, Yang
Gao, Yanmin
Luo, Cheng
Wu, Nengshun
Cheng, Zhounan
Qiu, Anni
Zhou, Yan
Zhang, Wendi
Chu, Minjie
Chang, Qing
author_sort Dong, Yang
collection PubMed
description BACKGROUND: The functional causal single-nucleotide polymorphisms (SNPs) associated with susceptibility to Mycoplasma pneumoniae Pneumonia (MPP) have scarcely been identified. In this study, we aimed to analyze the association between the functional expression quantitative trait locus (eQTL)-SNPs and the risk of MPP. METHODS: First, we identified reported genes associated with MPP from the human disease database, MalaCards. After investigating multiple databases, we systematically selected seven functional eQTL-SNPs (rs2070874, rs360720, rs8032531, rs4316, rs4353, rs7258241, and rs2250656). Finally, the selected eQTL-SNPs were genotyped using the TaqMan genotyping technology, and compared between 100 children with MPP and 178 healthy controls. RESULTS: We found that three eQTL-SNPs (rs8032531 in CD276 and rs4316 and rs4353 in ACE) were significantly associated with susceptibility to MPP. Joint analysis of the three eQTL-SNPs revealed that the risk of MPP increased with an increase in the number of risk alleles present. Plasma protein expression levels of CD276 and ACE were distinctively higher in children with MPP than in healthy children (CD276: P < 0.001; ACE: P = 0.001). CONCLUSION: Functional eQTL-SNPs in CD276 and ACE may affect the susceptibility to MPP. The risk of developing MPP is higher in patients harboring a greater number of unfavorable alleles of the aforementioned SNPs.
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spelling pubmed-92739902022-07-13 Novel Functional eQTL-SNPs Associated With Susceptibility to Mycoplasma pneumoniae Pneumonia in Children Dong, Yang Gao, Yanmin Luo, Cheng Wu, Nengshun Cheng, Zhounan Qiu, Anni Zhou, Yan Zhang, Wendi Chu, Minjie Chang, Qing Front Public Health Public Health BACKGROUND: The functional causal single-nucleotide polymorphisms (SNPs) associated with susceptibility to Mycoplasma pneumoniae Pneumonia (MPP) have scarcely been identified. In this study, we aimed to analyze the association between the functional expression quantitative trait locus (eQTL)-SNPs and the risk of MPP. METHODS: First, we identified reported genes associated with MPP from the human disease database, MalaCards. After investigating multiple databases, we systematically selected seven functional eQTL-SNPs (rs2070874, rs360720, rs8032531, rs4316, rs4353, rs7258241, and rs2250656). Finally, the selected eQTL-SNPs were genotyped using the TaqMan genotyping technology, and compared between 100 children with MPP and 178 healthy controls. RESULTS: We found that three eQTL-SNPs (rs8032531 in CD276 and rs4316 and rs4353 in ACE) were significantly associated with susceptibility to MPP. Joint analysis of the three eQTL-SNPs revealed that the risk of MPP increased with an increase in the number of risk alleles present. Plasma protein expression levels of CD276 and ACE were distinctively higher in children with MPP than in healthy children (CD276: P < 0.001; ACE: P = 0.001). CONCLUSION: Functional eQTL-SNPs in CD276 and ACE may affect the susceptibility to MPP. The risk of developing MPP is higher in patients harboring a greater number of unfavorable alleles of the aforementioned SNPs. Frontiers Media S.A. 2022-06-28 /pmc/articles/PMC9273990/ /pubmed/35836993 http://dx.doi.org/10.3389/fpubh.2022.899045 Text en Copyright © 2022 Dong, Gao, Luo, Wu, Cheng, Qiu, Zhou, Zhang, Chu and Chang. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Public Health
Dong, Yang
Gao, Yanmin
Luo, Cheng
Wu, Nengshun
Cheng, Zhounan
Qiu, Anni
Zhou, Yan
Zhang, Wendi
Chu, Minjie
Chang, Qing
Novel Functional eQTL-SNPs Associated With Susceptibility to Mycoplasma pneumoniae Pneumonia in Children
title Novel Functional eQTL-SNPs Associated With Susceptibility to Mycoplasma pneumoniae Pneumonia in Children
title_full Novel Functional eQTL-SNPs Associated With Susceptibility to Mycoplasma pneumoniae Pneumonia in Children
title_fullStr Novel Functional eQTL-SNPs Associated With Susceptibility to Mycoplasma pneumoniae Pneumonia in Children
title_full_unstemmed Novel Functional eQTL-SNPs Associated With Susceptibility to Mycoplasma pneumoniae Pneumonia in Children
title_short Novel Functional eQTL-SNPs Associated With Susceptibility to Mycoplasma pneumoniae Pneumonia in Children
title_sort novel functional eqtl-snps associated with susceptibility to mycoplasma pneumoniae pneumonia in children
topic Public Health
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9273990/
https://www.ncbi.nlm.nih.gov/pubmed/35836993
http://dx.doi.org/10.3389/fpubh.2022.899045
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