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The complete mitochondrial genome of Korean endemic loach Iksookimia pacifica (Teleostei, Cypriniformes, Cobitidae)
The complete mitochondrial genome of a Korean endemic species, Iksookimia pacifica (Teleostei: Cypriniformes: Cobitidae) was sequenced using the NGS method. Its total mitogenome was 16,561 bp in length, comprising 13 protein-coding genes (PCGs), 2 ribosomal RNA genes (rRNA), 22 transfer RNA genes (t...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Taylor & Francis
2022
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9275477/ https://www.ncbi.nlm.nih.gov/pubmed/35837492 http://dx.doi.org/10.1080/23802359.2022.2093677 |
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author | Yun, Seung Woon Kim, Hyun Tae |
author_facet | Yun, Seung Woon Kim, Hyun Tae |
author_sort | Yun, Seung Woon |
collection | PubMed |
description | The complete mitochondrial genome of a Korean endemic species, Iksookimia pacifica (Teleostei: Cypriniformes: Cobitidae) was sequenced using the NGS method. Its total mitogenome was 16,561 bp in length, comprising 13 protein-coding genes (PCGs), 2 ribosomal RNA genes (rRNA), 22 transfer RNA genes (tRNA), and 1 control region (D-loop). The gene order and content were congruent with those of other cobitid species. In the phylogenetic tree using the maximum likelihood method, I. pacifica was clearly distinguished and most closely related to I. koreensis. The mitogenome sequence data of I. pacifica will provide useful information on the phylogenetic relationship among Cobitidae species. |
format | Online Article Text |
id | pubmed-9275477 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-92754772022-07-13 The complete mitochondrial genome of Korean endemic loach Iksookimia pacifica (Teleostei, Cypriniformes, Cobitidae) Yun, Seung Woon Kim, Hyun Tae Mitochondrial DNA B Resour Mitogenome Announcement The complete mitochondrial genome of a Korean endemic species, Iksookimia pacifica (Teleostei: Cypriniformes: Cobitidae) was sequenced using the NGS method. Its total mitogenome was 16,561 bp in length, comprising 13 protein-coding genes (PCGs), 2 ribosomal RNA genes (rRNA), 22 transfer RNA genes (tRNA), and 1 control region (D-loop). The gene order and content were congruent with those of other cobitid species. In the phylogenetic tree using the maximum likelihood method, I. pacifica was clearly distinguished and most closely related to I. koreensis. The mitogenome sequence data of I. pacifica will provide useful information on the phylogenetic relationship among Cobitidae species. Taylor & Francis 2022-07-08 /pmc/articles/PMC9275477/ /pubmed/35837492 http://dx.doi.org/10.1080/23802359.2022.2093677 Text en © 2022 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Yun, Seung Woon Kim, Hyun Tae The complete mitochondrial genome of Korean endemic loach Iksookimia pacifica (Teleostei, Cypriniformes, Cobitidae) |
title | The complete mitochondrial genome of Korean endemic loach Iksookimia pacifica (Teleostei, Cypriniformes, Cobitidae) |
title_full | The complete mitochondrial genome of Korean endemic loach Iksookimia pacifica (Teleostei, Cypriniformes, Cobitidae) |
title_fullStr | The complete mitochondrial genome of Korean endemic loach Iksookimia pacifica (Teleostei, Cypriniformes, Cobitidae) |
title_full_unstemmed | The complete mitochondrial genome of Korean endemic loach Iksookimia pacifica (Teleostei, Cypriniformes, Cobitidae) |
title_short | The complete mitochondrial genome of Korean endemic loach Iksookimia pacifica (Teleostei, Cypriniformes, Cobitidae) |
title_sort | complete mitochondrial genome of korean endemic loach iksookimia pacifica (teleostei, cypriniformes, cobitidae) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9275477/ https://www.ncbi.nlm.nih.gov/pubmed/35837492 http://dx.doi.org/10.1080/23802359.2022.2093677 |
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