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The complete mitochondrial genome of Korean endemic loach Iksookimia pacifica (Teleostei, Cypriniformes, Cobitidae)

The complete mitochondrial genome of a Korean endemic species, Iksookimia pacifica (Teleostei: Cypriniformes: Cobitidae) was sequenced using the NGS method. Its total mitogenome was 16,561 bp in length, comprising 13 protein-coding genes (PCGs), 2 ribosomal RNA genes (rRNA), 22 transfer RNA genes (t...

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Autores principales: Yun, Seung Woon, Kim, Hyun Tae
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9275477/
https://www.ncbi.nlm.nih.gov/pubmed/35837492
http://dx.doi.org/10.1080/23802359.2022.2093677
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author Yun, Seung Woon
Kim, Hyun Tae
author_facet Yun, Seung Woon
Kim, Hyun Tae
author_sort Yun, Seung Woon
collection PubMed
description The complete mitochondrial genome of a Korean endemic species, Iksookimia pacifica (Teleostei: Cypriniformes: Cobitidae) was sequenced using the NGS method. Its total mitogenome was 16,561 bp in length, comprising 13 protein-coding genes (PCGs), 2 ribosomal RNA genes (rRNA), 22 transfer RNA genes (tRNA), and 1 control region (D-loop). The gene order and content were congruent with those of other cobitid species. In the phylogenetic tree using the maximum likelihood method, I. pacifica was clearly distinguished and most closely related to I. koreensis. The mitogenome sequence data of I. pacifica will provide useful information on the phylogenetic relationship among Cobitidae species.
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spelling pubmed-92754772022-07-13 The complete mitochondrial genome of Korean endemic loach Iksookimia pacifica (Teleostei, Cypriniformes, Cobitidae) Yun, Seung Woon Kim, Hyun Tae Mitochondrial DNA B Resour Mitogenome Announcement The complete mitochondrial genome of a Korean endemic species, Iksookimia pacifica (Teleostei: Cypriniformes: Cobitidae) was sequenced using the NGS method. Its total mitogenome was 16,561 bp in length, comprising 13 protein-coding genes (PCGs), 2 ribosomal RNA genes (rRNA), 22 transfer RNA genes (tRNA), and 1 control region (D-loop). The gene order and content were congruent with those of other cobitid species. In the phylogenetic tree using the maximum likelihood method, I. pacifica was clearly distinguished and most closely related to I. koreensis. The mitogenome sequence data of I. pacifica will provide useful information on the phylogenetic relationship among Cobitidae species. Taylor & Francis 2022-07-08 /pmc/articles/PMC9275477/ /pubmed/35837492 http://dx.doi.org/10.1080/23802359.2022.2093677 Text en © 2022 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Yun, Seung Woon
Kim, Hyun Tae
The complete mitochondrial genome of Korean endemic loach Iksookimia pacifica (Teleostei, Cypriniformes, Cobitidae)
title The complete mitochondrial genome of Korean endemic loach Iksookimia pacifica (Teleostei, Cypriniformes, Cobitidae)
title_full The complete mitochondrial genome of Korean endemic loach Iksookimia pacifica (Teleostei, Cypriniformes, Cobitidae)
title_fullStr The complete mitochondrial genome of Korean endemic loach Iksookimia pacifica (Teleostei, Cypriniformes, Cobitidae)
title_full_unstemmed The complete mitochondrial genome of Korean endemic loach Iksookimia pacifica (Teleostei, Cypriniformes, Cobitidae)
title_short The complete mitochondrial genome of Korean endemic loach Iksookimia pacifica (Teleostei, Cypriniformes, Cobitidae)
title_sort complete mitochondrial genome of korean endemic loach iksookimia pacifica (teleostei, cypriniformes, cobitidae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9275477/
https://www.ncbi.nlm.nih.gov/pubmed/35837492
http://dx.doi.org/10.1080/23802359.2022.2093677
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