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A TP53 Related Immune Prognostic Model for the Prediction of Clinical Outcomes and Therapeutic Responses in Lung Adenocarcinoma
TP53 is the most frequently mutated gene in lung adenocarcinoma (LUAD). The tumor immune microenvironment (TIM) is considered a vital factor that influences tumor progression and survival rate. The influence of TP53 mutation on TIM in LUAD has not been fully studied. Here we systematically investiga...
Autores principales: | , , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9275777/ https://www.ncbi.nlm.nih.gov/pubmed/35837383 http://dx.doi.org/10.3389/fimmu.2022.876355 |
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author | Zhang, Xiaonan Min, Simin Yang, Yifan Ding, Dushan Li, Qicai Liu, Saisai Tao, Tao Zhang, Ming Li, Baiqing Zhao, Shidi Ge, Rongjing Yang, Fan Li, Yan He, Xiaoyu Ma, Xiaoxiao Wang, Lian Wu, Tianyu Wang, Tao Wang, Guowen |
author_facet | Zhang, Xiaonan Min, Simin Yang, Yifan Ding, Dushan Li, Qicai Liu, Saisai Tao, Tao Zhang, Ming Li, Baiqing Zhao, Shidi Ge, Rongjing Yang, Fan Li, Yan He, Xiaoyu Ma, Xiaoxiao Wang, Lian Wu, Tianyu Wang, Tao Wang, Guowen |
author_sort | Zhang, Xiaonan |
collection | PubMed |
description | TP53 is the most frequently mutated gene in lung adenocarcinoma (LUAD). The tumor immune microenvironment (TIM) is considered a vital factor that influences tumor progression and survival rate. The influence of TP53 mutation on TIM in LUAD has not been fully studied. Here we systematically investigated the relationship and potential mechanisms between TP53 mutation status and immune response in LUAD. We constructed an immune prognostic model (IPM) using immune associated genes, which were expressed differentially between the TP53 mutant and wild type LUAD patients. We discovered that TP53 mutations were significantly associated with 5 immune related biological processes. Thirty-six immune genes were expressed differentially between TP53 mutant and wild type LUAD patients. An IPM was constructed using 3 immune genes to differentiate the prognostic survival in LUAD. The high-risk LUAD group displayed significantly higher proportions of dendritic cell resting, T cell CD4 memory resting and mast cell resting, and significantly low proportions of dendritic cell activated, T cell CD4 memory activated, and mast cell activated. Moreover, IPM was found to be an independent clinical feature and can be used to predict immunotherapy responses. In summary, we constructed and validated an IPM using 3 immune related genes, which provides a better understanding of the mechanism from an immunological perspectives. |
format | Online Article Text |
id | pubmed-9275777 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-92757772022-07-13 A TP53 Related Immune Prognostic Model for the Prediction of Clinical Outcomes and Therapeutic Responses in Lung Adenocarcinoma Zhang, Xiaonan Min, Simin Yang, Yifan Ding, Dushan Li, Qicai Liu, Saisai Tao, Tao Zhang, Ming Li, Baiqing Zhao, Shidi Ge, Rongjing Yang, Fan Li, Yan He, Xiaoyu Ma, Xiaoxiao Wang, Lian Wu, Tianyu Wang, Tao Wang, Guowen Front Immunol Immunology TP53 is the most frequently mutated gene in lung adenocarcinoma (LUAD). The tumor immune microenvironment (TIM) is considered a vital factor that influences tumor progression and survival rate. The influence of TP53 mutation on TIM in LUAD has not been fully studied. Here we systematically investigated the relationship and potential mechanisms between TP53 mutation status and immune response in LUAD. We constructed an immune prognostic model (IPM) using immune associated genes, which were expressed differentially between the TP53 mutant and wild type LUAD patients. We discovered that TP53 mutations were significantly associated with 5 immune related biological processes. Thirty-six immune genes were expressed differentially between TP53 mutant and wild type LUAD patients. An IPM was constructed using 3 immune genes to differentiate the prognostic survival in LUAD. The high-risk LUAD group displayed significantly higher proportions of dendritic cell resting, T cell CD4 memory resting and mast cell resting, and significantly low proportions of dendritic cell activated, T cell CD4 memory activated, and mast cell activated. Moreover, IPM was found to be an independent clinical feature and can be used to predict immunotherapy responses. In summary, we constructed and validated an IPM using 3 immune related genes, which provides a better understanding of the mechanism from an immunological perspectives. Frontiers Media S.A. 2022-06-28 /pmc/articles/PMC9275777/ /pubmed/35837383 http://dx.doi.org/10.3389/fimmu.2022.876355 Text en Copyright © 2022 Zhang, Min, Yang, Ding, Li, Liu, Tao, Zhang, Li, Zhao, Ge, Yang, Li, He, Ma, Wang, Wu, Wang and Wang https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Immunology Zhang, Xiaonan Min, Simin Yang, Yifan Ding, Dushan Li, Qicai Liu, Saisai Tao, Tao Zhang, Ming Li, Baiqing Zhao, Shidi Ge, Rongjing Yang, Fan Li, Yan He, Xiaoyu Ma, Xiaoxiao Wang, Lian Wu, Tianyu Wang, Tao Wang, Guowen A TP53 Related Immune Prognostic Model for the Prediction of Clinical Outcomes and Therapeutic Responses in Lung Adenocarcinoma |
title | A TP53 Related Immune Prognostic Model for the Prediction of Clinical Outcomes and Therapeutic Responses in Lung Adenocarcinoma |
title_full | A TP53 Related Immune Prognostic Model for the Prediction of Clinical Outcomes and Therapeutic Responses in Lung Adenocarcinoma |
title_fullStr | A TP53 Related Immune Prognostic Model for the Prediction of Clinical Outcomes and Therapeutic Responses in Lung Adenocarcinoma |
title_full_unstemmed | A TP53 Related Immune Prognostic Model for the Prediction of Clinical Outcomes and Therapeutic Responses in Lung Adenocarcinoma |
title_short | A TP53 Related Immune Prognostic Model for the Prediction of Clinical Outcomes and Therapeutic Responses in Lung Adenocarcinoma |
title_sort | tp53 related immune prognostic model for the prediction of clinical outcomes and therapeutic responses in lung adenocarcinoma |
topic | Immunology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9275777/ https://www.ncbi.nlm.nih.gov/pubmed/35837383 http://dx.doi.org/10.3389/fimmu.2022.876355 |
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