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Opal: an implementation science tool for machine learning clinical decision support in anesthesia
Opal is the first published example of a full-stack platform infrastructure for an implementation science designed for ML in anesthesia that solves the problem of leveraging ML for clinical decision support. Users interact with a secure online Opal web application to select a desired operating room...
Autores principales: | , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer Netherlands
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9275816/ https://www.ncbi.nlm.nih.gov/pubmed/34837585 http://dx.doi.org/10.1007/s10877-021-00774-1 |
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author | Bishara, Andrew Wong, Andrew Wang, Linshanshan Chopra, Manu Fan, Wudi Lin, Alan Fong, Nicholas Palacharla, Aditya Spinner, Jon Armstrong, Rachelle Pletcher, Mark J. Lituiev, Dmytro Hadley, Dexter Butte, Atul |
author_facet | Bishara, Andrew Wong, Andrew Wang, Linshanshan Chopra, Manu Fan, Wudi Lin, Alan Fong, Nicholas Palacharla, Aditya Spinner, Jon Armstrong, Rachelle Pletcher, Mark J. Lituiev, Dmytro Hadley, Dexter Butte, Atul |
author_sort | Bishara, Andrew |
collection | PubMed |
description | Opal is the first published example of a full-stack platform infrastructure for an implementation science designed for ML in anesthesia that solves the problem of leveraging ML for clinical decision support. Users interact with a secure online Opal web application to select a desired operating room (OR) case cohort for data extraction, visualize datasets with built-in graphing techniques, and run in-client ML or extract data for external use. Opal was used to obtain data from 29,004 unique OR cases from a single academic institution for pre-operative prediction of post-operative acute kidney injury (AKI) based on creatinine KDIGO criteria using predictors which included pre-operative demographic, past medical history, medications, and flowsheet information. To demonstrate utility with unsupervised learning, Opal was also used to extract intra-operative flowsheet data from 2995 unique OR cases and patients were clustered using PCA analysis and k-means clustering. A gradient boosting machine model was developed using an 80/20 train to test ratio and yielded an area under the receiver operating curve (ROC-AUC) of 0.85 with 95% CI [0.80–0.90]. At the default probability decision threshold of 0.5, the model sensitivity was 0.9 and the specificity was 0.8. K-means clustering was performed to partition the cases into two clusters and for hypothesis generation of potential groups of outcomes related to intraoperative vitals. Opal’s design has created streamlined ML functionality for researchers and clinicians in the perioperative setting and opens the door for many future clinical applications, including data mining, clinical simulation, high-frequency prediction, and quality improvement. SUPPLEMENTARY INFORMATION: The online version of this article contains supplementary material available 10.1007/s10877-021-00774-1. |
format | Online Article Text |
id | pubmed-9275816 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Springer Netherlands |
record_format | MEDLINE/PubMed |
spelling | pubmed-92758162022-09-25 Opal: an implementation science tool for machine learning clinical decision support in anesthesia Bishara, Andrew Wong, Andrew Wang, Linshanshan Chopra, Manu Fan, Wudi Lin, Alan Fong, Nicholas Palacharla, Aditya Spinner, Jon Armstrong, Rachelle Pletcher, Mark J. Lituiev, Dmytro Hadley, Dexter Butte, Atul J Clin Monit Comput Original Research Opal is the first published example of a full-stack platform infrastructure for an implementation science designed for ML in anesthesia that solves the problem of leveraging ML for clinical decision support. Users interact with a secure online Opal web application to select a desired operating room (OR) case cohort for data extraction, visualize datasets with built-in graphing techniques, and run in-client ML or extract data for external use. Opal was used to obtain data from 29,004 unique OR cases from a single academic institution for pre-operative prediction of post-operative acute kidney injury (AKI) based on creatinine KDIGO criteria using predictors which included pre-operative demographic, past medical history, medications, and flowsheet information. To demonstrate utility with unsupervised learning, Opal was also used to extract intra-operative flowsheet data from 2995 unique OR cases and patients were clustered using PCA analysis and k-means clustering. A gradient boosting machine model was developed using an 80/20 train to test ratio and yielded an area under the receiver operating curve (ROC-AUC) of 0.85 with 95% CI [0.80–0.90]. At the default probability decision threshold of 0.5, the model sensitivity was 0.9 and the specificity was 0.8. K-means clustering was performed to partition the cases into two clusters and for hypothesis generation of potential groups of outcomes related to intraoperative vitals. Opal’s design has created streamlined ML functionality for researchers and clinicians in the perioperative setting and opens the door for many future clinical applications, including data mining, clinical simulation, high-frequency prediction, and quality improvement. SUPPLEMENTARY INFORMATION: The online version of this article contains supplementary material available 10.1007/s10877-021-00774-1. Springer Netherlands 2021-11-27 2022 /pmc/articles/PMC9275816/ /pubmed/34837585 http://dx.doi.org/10.1007/s10877-021-00774-1 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Original Research Bishara, Andrew Wong, Andrew Wang, Linshanshan Chopra, Manu Fan, Wudi Lin, Alan Fong, Nicholas Palacharla, Aditya Spinner, Jon Armstrong, Rachelle Pletcher, Mark J. Lituiev, Dmytro Hadley, Dexter Butte, Atul Opal: an implementation science tool for machine learning clinical decision support in anesthesia |
title | Opal: an implementation science tool for machine learning clinical decision support in anesthesia |
title_full | Opal: an implementation science tool for machine learning clinical decision support in anesthesia |
title_fullStr | Opal: an implementation science tool for machine learning clinical decision support in anesthesia |
title_full_unstemmed | Opal: an implementation science tool for machine learning clinical decision support in anesthesia |
title_short | Opal: an implementation science tool for machine learning clinical decision support in anesthesia |
title_sort | opal: an implementation science tool for machine learning clinical decision support in anesthesia |
topic | Original Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9275816/ https://www.ncbi.nlm.nih.gov/pubmed/34837585 http://dx.doi.org/10.1007/s10877-021-00774-1 |
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