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Rhizosphere soil bacterial communities and nitrogen cycling affected by deciduous and evergreen tree species
Deciduous and evergreen trees differ in their responses to drought and nitrogen (N) demand. Whether or not these functional types affect the role of the bacterial community in the N cycle during drought remains uncertain. Two deciduous tree species (Alnus cremastogyne, an N(2)‐fixing species, and Li...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9277416/ https://www.ncbi.nlm.nih.gov/pubmed/35845380 http://dx.doi.org/10.1002/ece3.9103 |
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author | Liu, Jiantong Wang, Xinyu Liu, Lin Wu, Xuefeng Xia, Zhichao Guo, Qingxue |
author_facet | Liu, Jiantong Wang, Xinyu Liu, Lin Wu, Xuefeng Xia, Zhichao Guo, Qingxue |
author_sort | Liu, Jiantong |
collection | PubMed |
description | Deciduous and evergreen trees differ in their responses to drought and nitrogen (N) demand. Whether or not these functional types affect the role of the bacterial community in the N cycle during drought remains uncertain. Two deciduous tree species (Alnus cremastogyne, an N(2)‐fixing species, and Liquidambar formosana) and two evergreen trees (Cunninghamia lanceolata and Pinus massoniana) were used to assess factors in controlling rhizosphere soil bacterial community and N cycling functions. Photosynthetic rates and biomass production of plants, 16S rRNA sequencing and N‐cycling‐related genes of rhizosphere soil were measured. The relative abundance of the phyla Actinobacteria and Firmicutes was higher, and that of Proteobacteria, Acidobacteria, and Gemmatimondaetes was lower in rhizosphere soil of deciduous trees than that of evergreen. Beta‐diversity of bacterial community also significantly differed between the two types of trees. Deciduous trees showed significantly higher net photosynthetic rates and biomass production than evergreen species both at well water condition and short‐term drought. Root biomass was the most important factor in driving soil bacterial community and N‐cycling functions than total biomass and aboveground biomass. Furthermore, 44 bacteria genera with a decreasing response and 46 taxa showed an increased response along the root biomass gradient. Regarding N‐cycle‐related functional genes, copy numbers of ammonia‐oxidizing bacteria (AOB) and autotrophic ammonia‐oxidizing archaea (AOA), N(2) fixation gene (nifH), and denitrification genes (nirK, nirS) were significantly higher in the soil of deciduous trees than in that of the evergreen. Structural equation models explained 50.2%, 47.6%, 48.6%, 49.4%, and 37.3% of the variability in copy numbers of nifH, AOB, AOA, nirK, and nirS, respectively, and revealed that root biomass had significant positive effects on copy numbers of all N‐cycle functional genes. In conclusion, root biomass played key roles in affecting bacterial community structure and soil N cycling. Our findings have important implications for our understanding of plants control over bacterial community and N‐cycling function in artificial forest ecosystems. |
format | Online Article Text |
id | pubmed-9277416 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-92774162022-07-15 Rhizosphere soil bacterial communities and nitrogen cycling affected by deciduous and evergreen tree species Liu, Jiantong Wang, Xinyu Liu, Lin Wu, Xuefeng Xia, Zhichao Guo, Qingxue Ecol Evol Research Articles Deciduous and evergreen trees differ in their responses to drought and nitrogen (N) demand. Whether or not these functional types affect the role of the bacterial community in the N cycle during drought remains uncertain. Two deciduous tree species (Alnus cremastogyne, an N(2)‐fixing species, and Liquidambar formosana) and two evergreen trees (Cunninghamia lanceolata and Pinus massoniana) were used to assess factors in controlling rhizosphere soil bacterial community and N cycling functions. Photosynthetic rates and biomass production of plants, 16S rRNA sequencing and N‐cycling‐related genes of rhizosphere soil were measured. The relative abundance of the phyla Actinobacteria and Firmicutes was higher, and that of Proteobacteria, Acidobacteria, and Gemmatimondaetes was lower in rhizosphere soil of deciduous trees than that of evergreen. Beta‐diversity of bacterial community also significantly differed between the two types of trees. Deciduous trees showed significantly higher net photosynthetic rates and biomass production than evergreen species both at well water condition and short‐term drought. Root biomass was the most important factor in driving soil bacterial community and N‐cycling functions than total biomass and aboveground biomass. Furthermore, 44 bacteria genera with a decreasing response and 46 taxa showed an increased response along the root biomass gradient. Regarding N‐cycle‐related functional genes, copy numbers of ammonia‐oxidizing bacteria (AOB) and autotrophic ammonia‐oxidizing archaea (AOA), N(2) fixation gene (nifH), and denitrification genes (nirK, nirS) were significantly higher in the soil of deciduous trees than in that of the evergreen. Structural equation models explained 50.2%, 47.6%, 48.6%, 49.4%, and 37.3% of the variability in copy numbers of nifH, AOB, AOA, nirK, and nirS, respectively, and revealed that root biomass had significant positive effects on copy numbers of all N‐cycle functional genes. In conclusion, root biomass played key roles in affecting bacterial community structure and soil N cycling. Our findings have important implications for our understanding of plants control over bacterial community and N‐cycling function in artificial forest ecosystems. John Wiley and Sons Inc. 2022-07-13 /pmc/articles/PMC9277416/ /pubmed/35845380 http://dx.doi.org/10.1002/ece3.9103 Text en © 2022 The Authors. Ecology and Evolution published by John Wiley & Sons Ltd. https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Articles Liu, Jiantong Wang, Xinyu Liu, Lin Wu, Xuefeng Xia, Zhichao Guo, Qingxue Rhizosphere soil bacterial communities and nitrogen cycling affected by deciduous and evergreen tree species |
title | Rhizosphere soil bacterial communities and nitrogen cycling affected by deciduous and evergreen tree species |
title_full | Rhizosphere soil bacterial communities and nitrogen cycling affected by deciduous and evergreen tree species |
title_fullStr | Rhizosphere soil bacterial communities and nitrogen cycling affected by deciduous and evergreen tree species |
title_full_unstemmed | Rhizosphere soil bacterial communities and nitrogen cycling affected by deciduous and evergreen tree species |
title_short | Rhizosphere soil bacterial communities and nitrogen cycling affected by deciduous and evergreen tree species |
title_sort | rhizosphere soil bacterial communities and nitrogen cycling affected by deciduous and evergreen tree species |
topic | Research Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9277416/ https://www.ncbi.nlm.nih.gov/pubmed/35845380 http://dx.doi.org/10.1002/ece3.9103 |
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