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A review of reproducible and transparent research practices in urology publications from 2014 to2018

BACKGROUND: Reproducibility is essential for the integrity of scientific research. Reproducibility is measured by the ability of different investigators to replicate the outcomes of an original publication using the same materials and procedures. Unfortunately, reproducibility is not currently a sta...

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Autores principales: Rauh, Shelby, Johnson, Bradley S., Bowers, Aaron, Tritz, Daniel, Vassar, Benjamin Matthew
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9277815/
https://www.ncbi.nlm.nih.gov/pubmed/35820886
http://dx.doi.org/10.1186/s12894-022-01059-8
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author Rauh, Shelby
Johnson, Bradley S.
Bowers, Aaron
Tritz, Daniel
Vassar, Benjamin Matthew
author_facet Rauh, Shelby
Johnson, Bradley S.
Bowers, Aaron
Tritz, Daniel
Vassar, Benjamin Matthew
author_sort Rauh, Shelby
collection PubMed
description BACKGROUND: Reproducibility is essential for the integrity of scientific research. Reproducibility is measured by the ability of different investigators to replicate the outcomes of an original publication using the same materials and procedures. Unfortunately, reproducibility is not currently a standard being met by most scientific research. METHODS: For this review, we sampled 300 publications in the field of urology to assess for 14 indicators of reproducibility including material availability, raw data availability, analysis script availability, pre-registration information, links to protocols, and if the publication was available free to the public. Publications were also assessed for statements about conflicts of interest and funding sources. RESULTS: Of the 300 sample publications, 171 contained empirical data available for analysis of reproducibility. Of the 171 articles with empirical data to analyze, 0.58% provided links to protocols, 4.09% provided access to raw data, 3.09% provided access to materials, and 4.68% were pre-registered. None of the studies provided analysis scripts. Our review is cross-sectional in nature, including only PubMed indexed journals-published in English-and within a finite time period. Thus, our results should be interpreted in light of these considerations. CONCLUSION: Current urology research does not consistently provide the components needed to reproduce original studies. Collaborative efforts from investigators and journal editors are needed to improve research quality while minimizing waste and patient risk. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12894-022-01059-8.
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spelling pubmed-92778152022-07-14 A review of reproducible and transparent research practices in urology publications from 2014 to2018 Rauh, Shelby Johnson, Bradley S. Bowers, Aaron Tritz, Daniel Vassar, Benjamin Matthew BMC Urol Research Article BACKGROUND: Reproducibility is essential for the integrity of scientific research. Reproducibility is measured by the ability of different investigators to replicate the outcomes of an original publication using the same materials and procedures. Unfortunately, reproducibility is not currently a standard being met by most scientific research. METHODS: For this review, we sampled 300 publications in the field of urology to assess for 14 indicators of reproducibility including material availability, raw data availability, analysis script availability, pre-registration information, links to protocols, and if the publication was available free to the public. Publications were also assessed for statements about conflicts of interest and funding sources. RESULTS: Of the 300 sample publications, 171 contained empirical data available for analysis of reproducibility. Of the 171 articles with empirical data to analyze, 0.58% provided links to protocols, 4.09% provided access to raw data, 3.09% provided access to materials, and 4.68% were pre-registered. None of the studies provided analysis scripts. Our review is cross-sectional in nature, including only PubMed indexed journals-published in English-and within a finite time period. Thus, our results should be interpreted in light of these considerations. CONCLUSION: Current urology research does not consistently provide the components needed to reproduce original studies. Collaborative efforts from investigators and journal editors are needed to improve research quality while minimizing waste and patient risk. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12894-022-01059-8. BioMed Central 2022-07-11 /pmc/articles/PMC9277815/ /pubmed/35820886 http://dx.doi.org/10.1186/s12894-022-01059-8 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Research Article
Rauh, Shelby
Johnson, Bradley S.
Bowers, Aaron
Tritz, Daniel
Vassar, Benjamin Matthew
A review of reproducible and transparent research practices in urology publications from 2014 to2018
title A review of reproducible and transparent research practices in urology publications from 2014 to2018
title_full A review of reproducible and transparent research practices in urology publications from 2014 to2018
title_fullStr A review of reproducible and transparent research practices in urology publications from 2014 to2018
title_full_unstemmed A review of reproducible and transparent research practices in urology publications from 2014 to2018
title_short A review of reproducible and transparent research practices in urology publications from 2014 to2018
title_sort review of reproducible and transparent research practices in urology publications from 2014 to2018
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9277815/
https://www.ncbi.nlm.nih.gov/pubmed/35820886
http://dx.doi.org/10.1186/s12894-022-01059-8
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