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A novel four‐gene signature predicts immunotherapy response of patients with different cancers

BACKGROUND: Immune checkpoint blockade (ICB) therapy has demonstrated favorable clinical efficacy, particularly for advanced or difficult‐to‐treat cancer types. However, this therapy is ineffective for many patients displaying lack of immune response or resistance to ICB. This study aimed to establi...

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Autores principales: Liu, Yuanli, Ni, Mingyue, Li, Lamei, Wang, Junyan, Tu, Zhenzhen, Zhou, Haisheng, Zhang, Siping
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9279975/
https://www.ncbi.nlm.nih.gov/pubmed/35588138
http://dx.doi.org/10.1002/jcla.24494
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author Liu, Yuanli
Ni, Mingyue
Li, Lamei
Wang, Junyan
Tu, Zhenzhen
Zhou, Haisheng
Zhang, Siping
author_facet Liu, Yuanli
Ni, Mingyue
Li, Lamei
Wang, Junyan
Tu, Zhenzhen
Zhou, Haisheng
Zhang, Siping
author_sort Liu, Yuanli
collection PubMed
description BACKGROUND: Immune checkpoint blockade (ICB) therapy has demonstrated favorable clinical efficacy, particularly for advanced or difficult‐to‐treat cancer types. However, this therapy is ineffective for many patients displaying lack of immune response or resistance to ICB. This study aimed to establish a novel four‐gene signature (CD8A, CD8B, TCF7, and LEF1) to provide a prognostic immunotherapy biomarker for different cancers. METHODS: Transcriptome profiles and clinical data were obtained from The Cancer Genome Atlas database. Multivariate Cox regression analysis was used to establish a four‐gene signature. The R package estimate was used to obtain the immune score for every patient. RESULTS: Risk scores of the novel four‐gene signature could effectively divided all patients into high‐ and low‐risk groups, with distinct outcomes. The immune score calculated via the estimate package demonstrated that the four‐gene signature was significantly associated with the immune infiltration level. Furthermore, the four‐gene signature could predict the response to atezolizumab immunotherapy in patients with metastatic urothelial cancer. CONCLUSIONS: The novel four‐gene signature developed in this study is a good prognostic biomarker, as it could identify many kinds of patients with cancer who are likely to respond to and benefit from immunotherapy.
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spelling pubmed-92799752022-07-15 A novel four‐gene signature predicts immunotherapy response of patients with different cancers Liu, Yuanli Ni, Mingyue Li, Lamei Wang, Junyan Tu, Zhenzhen Zhou, Haisheng Zhang, Siping J Clin Lab Anal Research Articles BACKGROUND: Immune checkpoint blockade (ICB) therapy has demonstrated favorable clinical efficacy, particularly for advanced or difficult‐to‐treat cancer types. However, this therapy is ineffective for many patients displaying lack of immune response or resistance to ICB. This study aimed to establish a novel four‐gene signature (CD8A, CD8B, TCF7, and LEF1) to provide a prognostic immunotherapy biomarker for different cancers. METHODS: Transcriptome profiles and clinical data were obtained from The Cancer Genome Atlas database. Multivariate Cox regression analysis was used to establish a four‐gene signature. The R package estimate was used to obtain the immune score for every patient. RESULTS: Risk scores of the novel four‐gene signature could effectively divided all patients into high‐ and low‐risk groups, with distinct outcomes. The immune score calculated via the estimate package demonstrated that the four‐gene signature was significantly associated with the immune infiltration level. Furthermore, the four‐gene signature could predict the response to atezolizumab immunotherapy in patients with metastatic urothelial cancer. CONCLUSIONS: The novel four‐gene signature developed in this study is a good prognostic biomarker, as it could identify many kinds of patients with cancer who are likely to respond to and benefit from immunotherapy. John Wiley and Sons Inc. 2022-05-19 /pmc/articles/PMC9279975/ /pubmed/35588138 http://dx.doi.org/10.1002/jcla.24494 Text en © 2022 The Authors. Journal of Clinical Laboratory Analysis published by Wiley Periodicals LLC. https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Articles
Liu, Yuanli
Ni, Mingyue
Li, Lamei
Wang, Junyan
Tu, Zhenzhen
Zhou, Haisheng
Zhang, Siping
A novel four‐gene signature predicts immunotherapy response of patients with different cancers
title A novel four‐gene signature predicts immunotherapy response of patients with different cancers
title_full A novel four‐gene signature predicts immunotherapy response of patients with different cancers
title_fullStr A novel four‐gene signature predicts immunotherapy response of patients with different cancers
title_full_unstemmed A novel four‐gene signature predicts immunotherapy response of patients with different cancers
title_short A novel four‐gene signature predicts immunotherapy response of patients with different cancers
title_sort novel four‐gene signature predicts immunotherapy response of patients with different cancers
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9279975/
https://www.ncbi.nlm.nih.gov/pubmed/35588138
http://dx.doi.org/10.1002/jcla.24494
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