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Expression Profiles of the Ovine IL18 Gene and Association of Its Polymorphism With Hematologic Parameters in Hu Lambs
Hematological traits are important indexes to evaluate health status and immunological conditions in human and livestock. In this study, we measured the hematologic indexes of 819 male Hu lambs and performed the descriptive statistical analysis. The results showed the coefficients of variation of pa...
Autores principales: | , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Frontiers Media S.A.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9280051/ https://www.ncbi.nlm.nih.gov/pubmed/35847634 http://dx.doi.org/10.3389/fvets.2022.925928 |
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author | Zhang, Deyin Zhang, Xiaoxue Li, Fadi Zhao, Yuan Li, Xiaolong Wang, Jianghui Zhao, Liming Yang, Xiaobin Zhang, Yukun Xu, Dan Cheng, Jiangbo Li, Wenxin Lin, Changchun Zhou, Bubo Wang, Weimin |
author_facet | Zhang, Deyin Zhang, Xiaoxue Li, Fadi Zhao, Yuan Li, Xiaolong Wang, Jianghui Zhao, Liming Yang, Xiaobin Zhang, Yukun Xu, Dan Cheng, Jiangbo Li, Wenxin Lin, Changchun Zhou, Bubo Wang, Weimin |
author_sort | Zhang, Deyin |
collection | PubMed |
description | Hematological traits are important indexes to evaluate health status and immunological conditions in human and livestock. In this study, we measured the hematologic indexes of 819 male Hu lambs and performed the descriptive statistical analysis. The results showed the coefficients of variation of partial indexes were >10%, and the heritability for mean erythrocyte volume (MCV), white blood cell count (WBC), hemoglobin concentration (HGB), hematocrit (HCT), and red blood cell (RBC) distribution-standard deviation (RDW_SD) were medium to high, ranging from 0.17 to 0.43. In addition, Interleukin 18 (IL18), as an important regulator of both innate and acquired immune responses, was selected as candidate gene and subjected to the expression profile analysis, single nucleotide polymorphism (SNP) scanning and association analysis by using quantitative real-time PCR (qRT-PCR), PCR amplification, Sanger sequencing, and KASP genotyping. The results of qRT-PCR indicated that IL18 is predominantly expressed in lymph and lung compared with that in the other tested tissues. In addition, three novel polymorphisms (g. 24991544 A > G, g. 24991651 A > G, and g. 24991749 C > T) were identified in IL18, and the three SNPs were in a strong linkage state. Therefore, only a SNP was genotyped and performed association analysis in the enlarged experimental population, the result of association analysis demonstrated that the polymorphism g. 24991651 A > G was significantly associated with RBC, MCV, MCHC, and RDW_CV. These results will provide the reference values and the novel genetic markers of hematological parameters in sheep. |
format | Online Article Text |
id | pubmed-9280051 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-92800512022-07-15 Expression Profiles of the Ovine IL18 Gene and Association of Its Polymorphism With Hematologic Parameters in Hu Lambs Zhang, Deyin Zhang, Xiaoxue Li, Fadi Zhao, Yuan Li, Xiaolong Wang, Jianghui Zhao, Liming Yang, Xiaobin Zhang, Yukun Xu, Dan Cheng, Jiangbo Li, Wenxin Lin, Changchun Zhou, Bubo Wang, Weimin Front Vet Sci Veterinary Science Hematological traits are important indexes to evaluate health status and immunological conditions in human and livestock. In this study, we measured the hematologic indexes of 819 male Hu lambs and performed the descriptive statistical analysis. The results showed the coefficients of variation of partial indexes were >10%, and the heritability for mean erythrocyte volume (MCV), white blood cell count (WBC), hemoglobin concentration (HGB), hematocrit (HCT), and red blood cell (RBC) distribution-standard deviation (RDW_SD) were medium to high, ranging from 0.17 to 0.43. In addition, Interleukin 18 (IL18), as an important regulator of both innate and acquired immune responses, was selected as candidate gene and subjected to the expression profile analysis, single nucleotide polymorphism (SNP) scanning and association analysis by using quantitative real-time PCR (qRT-PCR), PCR amplification, Sanger sequencing, and KASP genotyping. The results of qRT-PCR indicated that IL18 is predominantly expressed in lymph and lung compared with that in the other tested tissues. In addition, three novel polymorphisms (g. 24991544 A > G, g. 24991651 A > G, and g. 24991749 C > T) were identified in IL18, and the three SNPs were in a strong linkage state. Therefore, only a SNP was genotyped and performed association analysis in the enlarged experimental population, the result of association analysis demonstrated that the polymorphism g. 24991651 A > G was significantly associated with RBC, MCV, MCHC, and RDW_CV. These results will provide the reference values and the novel genetic markers of hematological parameters in sheep. Frontiers Media S.A. 2022-06-30 /pmc/articles/PMC9280051/ /pubmed/35847634 http://dx.doi.org/10.3389/fvets.2022.925928 Text en Copyright © 2022 Zhang, Zhang, Li, Zhao, Li, Wang, Zhao, Yang, Zhang, Xu, Cheng, Li, Lin, Zhou and Wang. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Veterinary Science Zhang, Deyin Zhang, Xiaoxue Li, Fadi Zhao, Yuan Li, Xiaolong Wang, Jianghui Zhao, Liming Yang, Xiaobin Zhang, Yukun Xu, Dan Cheng, Jiangbo Li, Wenxin Lin, Changchun Zhou, Bubo Wang, Weimin Expression Profiles of the Ovine IL18 Gene and Association of Its Polymorphism With Hematologic Parameters in Hu Lambs |
title | Expression Profiles of the Ovine IL18 Gene and Association of Its Polymorphism With Hematologic Parameters in Hu Lambs |
title_full | Expression Profiles of the Ovine IL18 Gene and Association of Its Polymorphism With Hematologic Parameters in Hu Lambs |
title_fullStr | Expression Profiles of the Ovine IL18 Gene and Association of Its Polymorphism With Hematologic Parameters in Hu Lambs |
title_full_unstemmed | Expression Profiles of the Ovine IL18 Gene and Association of Its Polymorphism With Hematologic Parameters in Hu Lambs |
title_short | Expression Profiles of the Ovine IL18 Gene and Association of Its Polymorphism With Hematologic Parameters in Hu Lambs |
title_sort | expression profiles of the ovine il18 gene and association of its polymorphism with hematologic parameters in hu lambs |
topic | Veterinary Science |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9280051/ https://www.ncbi.nlm.nih.gov/pubmed/35847634 http://dx.doi.org/10.3389/fvets.2022.925928 |
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