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Cloud Computing for COVID-19: Lessons Learned From Massively Parallel Models of Ventilator Splitting
A patient-specific airflow simulation was developed to help address the pressing need for an expansion of the ventilator capacity in response to the COVID-19 pandemic. The computational model provides guidance regarding how to split a ventilator between two or more patients with differing respirator...
Formato: | Online Artículo Texto |
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Lenguaje: | English |
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IEEE
2020
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9280799/ https://www.ncbi.nlm.nih.gov/pubmed/35939281 http://dx.doi.org/10.1109/MCSE.2020.3024062 |
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collection | PubMed |
description | A patient-specific airflow simulation was developed to help address the pressing need for an expansion of the ventilator capacity in response to the COVID-19 pandemic. The computational model provides guidance regarding how to split a ventilator between two or more patients with differing respiratory physiologies. To address the need for fast deployment and identification of optimal patient-specific tuning, there was a need to simulate hundreds of millions of different clinically relevant parameter combinations in a short time. This task, driven by the dire circumstances, presented unique computational and research challenges. We present here the guiding principles and lessons learned as to how a large-scale and robust cloud instance was designed and deployed within 24 hours and 800 000 compute hours were utilized in a 72-hour period. We discuss the design choices to enable a quick turnaround of the model, execute the simulation, and create an intuitive and interactive interface. |
format | Online Article Text |
id | pubmed-9280799 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | IEEE |
record_format | MEDLINE/PubMed |
spelling | pubmed-92807992022-08-01 Cloud Computing for COVID-19: Lessons Learned From Massively Parallel Models of Ventilator Splitting Comput Sci Eng Theme Article: Computational Science in the Battle Against COVID-19 A patient-specific airflow simulation was developed to help address the pressing need for an expansion of the ventilator capacity in response to the COVID-19 pandemic. The computational model provides guidance regarding how to split a ventilator between two or more patients with differing respiratory physiologies. To address the need for fast deployment and identification of optimal patient-specific tuning, there was a need to simulate hundreds of millions of different clinically relevant parameter combinations in a short time. This task, driven by the dire circumstances, presented unique computational and research challenges. We present here the guiding principles and lessons learned as to how a large-scale and robust cloud instance was designed and deployed within 24 hours and 800 000 compute hours were utilized in a 72-hour period. We discuss the design choices to enable a quick turnaround of the model, execute the simulation, and create an intuitive and interactive interface. IEEE 2020-09-21 /pmc/articles/PMC9280799/ /pubmed/35939281 http://dx.doi.org/10.1109/MCSE.2020.3024062 Text en This article is free to access and download, along with rights for full text and data mining, re-use and analysis. |
spellingShingle | Theme Article: Computational Science in the Battle Against COVID-19 Cloud Computing for COVID-19: Lessons Learned From Massively Parallel Models of Ventilator Splitting |
title | Cloud Computing for COVID-19: Lessons Learned From Massively Parallel Models of Ventilator Splitting |
title_full | Cloud Computing for COVID-19: Lessons Learned From Massively Parallel Models of Ventilator Splitting |
title_fullStr | Cloud Computing for COVID-19: Lessons Learned From Massively Parallel Models of Ventilator Splitting |
title_full_unstemmed | Cloud Computing for COVID-19: Lessons Learned From Massively Parallel Models of Ventilator Splitting |
title_short | Cloud Computing for COVID-19: Lessons Learned From Massively Parallel Models of Ventilator Splitting |
title_sort | cloud computing for covid-19: lessons learned from massively parallel models of ventilator splitting |
topic | Theme Article: Computational Science in the Battle Against COVID-19 |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9280799/ https://www.ncbi.nlm.nih.gov/pubmed/35939281 http://dx.doi.org/10.1109/MCSE.2020.3024062 |
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