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Cloud Computing for COVID-19: Lessons Learned From Massively Parallel Models of Ventilator Splitting

A patient-specific airflow simulation was developed to help address the pressing need for an expansion of the ventilator capacity in response to the COVID-19 pandemic. The computational model provides guidance regarding how to split a ventilator between two or more patients with differing respirator...

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Formato: Online Artículo Texto
Lenguaje:English
Publicado: IEEE 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9280799/
https://www.ncbi.nlm.nih.gov/pubmed/35939281
http://dx.doi.org/10.1109/MCSE.2020.3024062
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description A patient-specific airflow simulation was developed to help address the pressing need for an expansion of the ventilator capacity in response to the COVID-19 pandemic. The computational model provides guidance regarding how to split a ventilator between two or more patients with differing respiratory physiologies. To address the need for fast deployment and identification of optimal patient-specific tuning, there was a need to simulate hundreds of millions of different clinically relevant parameter combinations in a short time. This task, driven by the dire circumstances, presented unique computational and research challenges. We present here the guiding principles and lessons learned as to how a large-scale and robust cloud instance was designed and deployed within 24 hours and 800 000 compute hours were utilized in a 72-hour period. We discuss the design choices to enable a quick turnaround of the model, execute the simulation, and create an intuitive and interactive interface.
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spelling pubmed-92807992022-08-01 Cloud Computing for COVID-19: Lessons Learned From Massively Parallel Models of Ventilator Splitting Comput Sci Eng Theme Article: Computational Science in the Battle Against COVID-19 A patient-specific airflow simulation was developed to help address the pressing need for an expansion of the ventilator capacity in response to the COVID-19 pandemic. The computational model provides guidance regarding how to split a ventilator between two or more patients with differing respiratory physiologies. To address the need for fast deployment and identification of optimal patient-specific tuning, there was a need to simulate hundreds of millions of different clinically relevant parameter combinations in a short time. This task, driven by the dire circumstances, presented unique computational and research challenges. We present here the guiding principles and lessons learned as to how a large-scale and robust cloud instance was designed and deployed within 24 hours and 800 000 compute hours were utilized in a 72-hour period. We discuss the design choices to enable a quick turnaround of the model, execute the simulation, and create an intuitive and interactive interface. IEEE 2020-09-21 /pmc/articles/PMC9280799/ /pubmed/35939281 http://dx.doi.org/10.1109/MCSE.2020.3024062 Text en This article is free to access and download, along with rights for full text and data mining, re-use and analysis.
spellingShingle Theme Article: Computational Science in the Battle Against COVID-19
Cloud Computing for COVID-19: Lessons Learned From Massively Parallel Models of Ventilator Splitting
title Cloud Computing for COVID-19: Lessons Learned From Massively Parallel Models of Ventilator Splitting
title_full Cloud Computing for COVID-19: Lessons Learned From Massively Parallel Models of Ventilator Splitting
title_fullStr Cloud Computing for COVID-19: Lessons Learned From Massively Parallel Models of Ventilator Splitting
title_full_unstemmed Cloud Computing for COVID-19: Lessons Learned From Massively Parallel Models of Ventilator Splitting
title_short Cloud Computing for COVID-19: Lessons Learned From Massively Parallel Models of Ventilator Splitting
title_sort cloud computing for covid-19: lessons learned from massively parallel models of ventilator splitting
topic Theme Article: Computational Science in the Battle Against COVID-19
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9280799/
https://www.ncbi.nlm.nih.gov/pubmed/35939281
http://dx.doi.org/10.1109/MCSE.2020.3024062
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