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Nonconventional NMR Spin-Coupling Constants in Oligosaccharide Conformational Modeling: Structural Dependencies Determined from Density Functional Theory Calculations
[Image: see text] Nonconventional NMR spin-coupling constants were investigated to determine their potential as conformational constraints in MA’AT modeling of the O-glycosidic linkages of oligosaccharides. Four ((1)J(C1′,H1′), (1)J(C1′,C2′), (2)J(C1′,H2′), and (2)J(C2′,H1′)) and eight ((1)J(C4,H4),...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Chemical Society
2022
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9280969/ https://www.ncbi.nlm.nih.gov/pubmed/35847250 http://dx.doi.org/10.1021/acsomega.2c02793 |
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author | Meredith, Reagan J. Carmichael, Ian Serianni, Anthony S. |
author_facet | Meredith, Reagan J. Carmichael, Ian Serianni, Anthony S. |
author_sort | Meredith, Reagan J. |
collection | PubMed |
description | [Image: see text] Nonconventional NMR spin-coupling constants were investigated to determine their potential as conformational constraints in MA’AT modeling of the O-glycosidic linkages of oligosaccharides. Four ((1)J(C1′,H1′), (1)J(C1′,C2′), (2)J(C1′,H2′), and (2)J(C2′,H1′)) and eight ((1)J(C4,H4), (1)J(C3,C4), (1)J(C4,C5), (2)J(C3,H4), (2)J(C4,H3), (2)J(C5,H4), (2)J(C4,H5), and (2)J(C3,C5)) spin-couplings in methyl β-d-galactopyranosyl-(1→4)-β-d-glucopyranoside (methyl β-lactoside) were calculated using density functional theory (DFT) to determine their dependencies on O-glycosidic linkage C–O torsion angles, ϕ and ψ, respectively. Long-range (4)J(H1′,H4) was also examined as a potential conformational constraint of either ϕ or ψ. Secondary effects of exocyclic (hydroxyl) C–O bond rotation within or proximal to these coupling pathways were investigated. Based on the findings of methyl β-lactoside, analogous J-couplings were studied in five additional two-bond O-glycosidic linkages [βGlcNAc-(1→4)-βMan, 2-deoxy-βGlc-(1→4)-βGlc, αMan-(1→3)-βMan, αMan-(1→2)-αMan, and βGlcNAc(1→2)-αMan] to determine whether the coupling behaviors observed in methyl β-lactoside were more broadly observed. Of the 13 nonconventional J-couplings studied, 7 exhibit properties that may be useful in future MA’AT modeling of O-glycosidic linkages, none of which involve coupling pathways that include the linkage C–O bonds. The findings also provide new insights into the general effects of exocyclic C–O bond conformation on the magnitude of experimental spin-couplings in saccharides and other hydroxyl-containing molecules. |
format | Online Article Text |
id | pubmed-9280969 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | American Chemical Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-92809692022-07-15 Nonconventional NMR Spin-Coupling Constants in Oligosaccharide Conformational Modeling: Structural Dependencies Determined from Density Functional Theory Calculations Meredith, Reagan J. Carmichael, Ian Serianni, Anthony S. ACS Omega [Image: see text] Nonconventional NMR spin-coupling constants were investigated to determine their potential as conformational constraints in MA’AT modeling of the O-glycosidic linkages of oligosaccharides. Four ((1)J(C1′,H1′), (1)J(C1′,C2′), (2)J(C1′,H2′), and (2)J(C2′,H1′)) and eight ((1)J(C4,H4), (1)J(C3,C4), (1)J(C4,C5), (2)J(C3,H4), (2)J(C4,H3), (2)J(C5,H4), (2)J(C4,H5), and (2)J(C3,C5)) spin-couplings in methyl β-d-galactopyranosyl-(1→4)-β-d-glucopyranoside (methyl β-lactoside) were calculated using density functional theory (DFT) to determine their dependencies on O-glycosidic linkage C–O torsion angles, ϕ and ψ, respectively. Long-range (4)J(H1′,H4) was also examined as a potential conformational constraint of either ϕ or ψ. Secondary effects of exocyclic (hydroxyl) C–O bond rotation within or proximal to these coupling pathways were investigated. Based on the findings of methyl β-lactoside, analogous J-couplings were studied in five additional two-bond O-glycosidic linkages [βGlcNAc-(1→4)-βMan, 2-deoxy-βGlc-(1→4)-βGlc, αMan-(1→3)-βMan, αMan-(1→2)-αMan, and βGlcNAc(1→2)-αMan] to determine whether the coupling behaviors observed in methyl β-lactoside were more broadly observed. Of the 13 nonconventional J-couplings studied, 7 exhibit properties that may be useful in future MA’AT modeling of O-glycosidic linkages, none of which involve coupling pathways that include the linkage C–O bonds. The findings also provide new insights into the general effects of exocyclic C–O bond conformation on the magnitude of experimental spin-couplings in saccharides and other hydroxyl-containing molecules. American Chemical Society 2022-07-01 /pmc/articles/PMC9280969/ /pubmed/35847250 http://dx.doi.org/10.1021/acsomega.2c02793 Text en © 2022 The Authors. Published by American Chemical Society https://creativecommons.org/licenses/by-nc-nd/4.0/Permits non-commercial access and re-use, provided that author attribution and integrity are maintained; but does not permit creation of adaptations or other derivative works (https://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Meredith, Reagan J. Carmichael, Ian Serianni, Anthony S. Nonconventional NMR Spin-Coupling Constants in Oligosaccharide Conformational Modeling: Structural Dependencies Determined from Density Functional Theory Calculations |
title | Nonconventional NMR Spin-Coupling
Constants in Oligosaccharide Conformational Modeling: Structural Dependencies
Determined from Density Functional Theory Calculations |
title_full | Nonconventional NMR Spin-Coupling
Constants in Oligosaccharide Conformational Modeling: Structural Dependencies
Determined from Density Functional Theory Calculations |
title_fullStr | Nonconventional NMR Spin-Coupling
Constants in Oligosaccharide Conformational Modeling: Structural Dependencies
Determined from Density Functional Theory Calculations |
title_full_unstemmed | Nonconventional NMR Spin-Coupling
Constants in Oligosaccharide Conformational Modeling: Structural Dependencies
Determined from Density Functional Theory Calculations |
title_short | Nonconventional NMR Spin-Coupling
Constants in Oligosaccharide Conformational Modeling: Structural Dependencies
Determined from Density Functional Theory Calculations |
title_sort | nonconventional nmr spin-coupling
constants in oligosaccharide conformational modeling: structural dependencies
determined from density functional theory calculations |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9280969/ https://www.ncbi.nlm.nih.gov/pubmed/35847250 http://dx.doi.org/10.1021/acsomega.2c02793 |
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