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A Hybrid Machine Learning Approach for Structure Stability Prediction in Molecular Co-crystal Screenings
[Image: see text] Co-crystals are a highly interesting material class as varying their components and stoichiometry in principle allows tuning supramolecular assemblies toward desired physical properties. The in silico prediction of co-crystal structures represents a daunting task, however, as they...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Chemical Society
2022
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9281391/ https://www.ncbi.nlm.nih.gov/pubmed/35709378 http://dx.doi.org/10.1021/acs.jctc.2c00343 |
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author | Wengert, Simon Csányi, Gábor Reuter, Karsten Margraf, Johannes T. |
author_facet | Wengert, Simon Csányi, Gábor Reuter, Karsten Margraf, Johannes T. |
author_sort | Wengert, Simon |
collection | PubMed |
description | [Image: see text] Co-crystals are a highly interesting material class as varying their components and stoichiometry in principle allows tuning supramolecular assemblies toward desired physical properties. The in silico prediction of co-crystal structures represents a daunting task, however, as they span a vast search space and usually feature large unit cells. This requires theoretical models that are accurate and fast to evaluate, a combination that can in principle be accomplished by modern machine-learned (ML) potentials trained on first-principles data. Crucially, these ML potentials need to account for the description of long-range interactions, which are essential for the stability and structure of molecular crystals. In this contribution, we present a strategy for developing Δ-ML potentials for co-crystals, which use a physical baseline model to describe long-range interactions. The applicability of this approach is demonstrated for co-crystals of variable composition consisting of an active pharmaceutical ingredient and various co-formers. We find that the Δ-ML approach offers a strong and consistent improvement over the density functional tight binding baseline. Importantly, this even holds true when extrapolating beyond the scope of the training set, for instance in molecular dynamics simulations under ambient conditions. |
format | Online Article Text |
id | pubmed-9281391 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | American Chemical Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-92813912022-07-15 A Hybrid Machine Learning Approach for Structure Stability Prediction in Molecular Co-crystal Screenings Wengert, Simon Csányi, Gábor Reuter, Karsten Margraf, Johannes T. J Chem Theory Comput [Image: see text] Co-crystals are a highly interesting material class as varying their components and stoichiometry in principle allows tuning supramolecular assemblies toward desired physical properties. The in silico prediction of co-crystal structures represents a daunting task, however, as they span a vast search space and usually feature large unit cells. This requires theoretical models that are accurate and fast to evaluate, a combination that can in principle be accomplished by modern machine-learned (ML) potentials trained on first-principles data. Crucially, these ML potentials need to account for the description of long-range interactions, which are essential for the stability and structure of molecular crystals. In this contribution, we present a strategy for developing Δ-ML potentials for co-crystals, which use a physical baseline model to describe long-range interactions. The applicability of this approach is demonstrated for co-crystals of variable composition consisting of an active pharmaceutical ingredient and various co-formers. We find that the Δ-ML approach offers a strong and consistent improvement over the density functional tight binding baseline. Importantly, this even holds true when extrapolating beyond the scope of the training set, for instance in molecular dynamics simulations under ambient conditions. American Chemical Society 2022-06-16 2022-07-12 /pmc/articles/PMC9281391/ /pubmed/35709378 http://dx.doi.org/10.1021/acs.jctc.2c00343 Text en © 2022 The Authors. Published by American Chemical Society https://creativecommons.org/licenses/by/4.0/Permits the broadest form of re-use including for commercial purposes, provided that author attribution and integrity are maintained (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Wengert, Simon Csányi, Gábor Reuter, Karsten Margraf, Johannes T. A Hybrid Machine Learning Approach for Structure Stability Prediction in Molecular Co-crystal Screenings |
title | A Hybrid Machine Learning Approach for Structure Stability
Prediction in Molecular Co-crystal Screenings |
title_full | A Hybrid Machine Learning Approach for Structure Stability
Prediction in Molecular Co-crystal Screenings |
title_fullStr | A Hybrid Machine Learning Approach for Structure Stability
Prediction in Molecular Co-crystal Screenings |
title_full_unstemmed | A Hybrid Machine Learning Approach for Structure Stability
Prediction in Molecular Co-crystal Screenings |
title_short | A Hybrid Machine Learning Approach for Structure Stability
Prediction in Molecular Co-crystal Screenings |
title_sort | hybrid machine learning approach for structure stability
prediction in molecular co-crystal screenings |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9281391/ https://www.ncbi.nlm.nih.gov/pubmed/35709378 http://dx.doi.org/10.1021/acs.jctc.2c00343 |
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