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High expression of MMP28 indicates unfavorable prognosis in pancreatic cancer

To investigate the expression pattern and diagnostic performance of matrix metalloproteinase 28 (MMP28) in pancreatic cancer (PC). The RNA-seq data of PC and normal pancreas tissue were acquired from The Cancer Genome Atlas (TCGA) and Genotype-Tissue Expression. Clinical information of PC that inclu...

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Autores principales: Chen, Zhitao, Huang, Jiacheng, Li, Mengxia, Zhang, Lele, Wan, Dalong, Lin, Shengzhang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Lippincott Williams & Wilkins 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9282082/
https://www.ncbi.nlm.nih.gov/pubmed/33761734
http://dx.doi.org/10.1097/MD.0000000000025320
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author Chen, Zhitao
Huang, Jiacheng
Li, Mengxia
Zhang, Lele
Wan, Dalong
Lin, Shengzhang
author_facet Chen, Zhitao
Huang, Jiacheng
Li, Mengxia
Zhang, Lele
Wan, Dalong
Lin, Shengzhang
author_sort Chen, Zhitao
collection PubMed
description To investigate the expression pattern and diagnostic performance of matrix metalloproteinase 28 (MMP28) in pancreatic cancer (PC). The RNA-seq data of PC and normal pancreas tissue were acquired from The Cancer Genome Atlas (TCGA) and Genotype-Tissue Expression. Clinical information of PC that included prognostic data was obtained from TCGA. Later, Fisher exact test was applied for comparison of different clinicopathological features between high and low expression of MMP28 in PC. Afterwards, Kaplan-Meier survival analysis and Cox analysis (univariate and multivariate analysis) were used to explore the prognostic performance of MMP28 in PC cohort. Finally, gene set enrichment analysis (GSEA) revealed the potential signaling pathways related to high expression of MMP28 in PC. Upregulation of MMP28 was identified in PC tissue compared to normal pancreas tissue (P < .001). Overexpression of MMP28 was related to histological grade (P < .001), M classification (P = .014), and survival status (P = .028). Kaplan-Meier survival analysis revealed that high level of MMP28 implied unfavorable prognosis in PC (P = .002). Multivariate analysis confirmed that MMP28 was an independent risk factor in PC (hazard rate = 1.308, P = .018). Our GSEA analysis found that signaling pathways including glycolysis, p53 pathway, notch signaling, estrogen response late, cholesterol homeostasis, estrogen response early, mitotic spindle, and transforming growth factor beta signaling were enriched in the group with higher MMP28 expression. High expression of MMP28 could be identified in PC, which also served as an independent risk element for PC.
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spelling pubmed-92820822022-08-02 High expression of MMP28 indicates unfavorable prognosis in pancreatic cancer Chen, Zhitao Huang, Jiacheng Li, Mengxia Zhang, Lele Wan, Dalong Lin, Shengzhang Medicine (Baltimore) 3500 To investigate the expression pattern and diagnostic performance of matrix metalloproteinase 28 (MMP28) in pancreatic cancer (PC). The RNA-seq data of PC and normal pancreas tissue were acquired from The Cancer Genome Atlas (TCGA) and Genotype-Tissue Expression. Clinical information of PC that included prognostic data was obtained from TCGA. Later, Fisher exact test was applied for comparison of different clinicopathological features between high and low expression of MMP28 in PC. Afterwards, Kaplan-Meier survival analysis and Cox analysis (univariate and multivariate analysis) were used to explore the prognostic performance of MMP28 in PC cohort. Finally, gene set enrichment analysis (GSEA) revealed the potential signaling pathways related to high expression of MMP28 in PC. Upregulation of MMP28 was identified in PC tissue compared to normal pancreas tissue (P < .001). Overexpression of MMP28 was related to histological grade (P < .001), M classification (P = .014), and survival status (P = .028). Kaplan-Meier survival analysis revealed that high level of MMP28 implied unfavorable prognosis in PC (P = .002). Multivariate analysis confirmed that MMP28 was an independent risk factor in PC (hazard rate = 1.308, P = .018). Our GSEA analysis found that signaling pathways including glycolysis, p53 pathway, notch signaling, estrogen response late, cholesterol homeostasis, estrogen response early, mitotic spindle, and transforming growth factor beta signaling were enriched in the group with higher MMP28 expression. High expression of MMP28 could be identified in PC, which also served as an independent risk element for PC. Lippincott Williams & Wilkins 2021-03-26 /pmc/articles/PMC9282082/ /pubmed/33761734 http://dx.doi.org/10.1097/MD.0000000000025320 Text en Copyright © 2021 the Author(s). Published by Wolters Kluwer Health, Inc. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the Creative Commons Attribution License 4.0 (CCBY), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. http://creativecommons.org/licenses/by/4.0 (https://creativecommons.org/licenses/by/4.0/)
spellingShingle 3500
Chen, Zhitao
Huang, Jiacheng
Li, Mengxia
Zhang, Lele
Wan, Dalong
Lin, Shengzhang
High expression of MMP28 indicates unfavorable prognosis in pancreatic cancer
title High expression of MMP28 indicates unfavorable prognosis in pancreatic cancer
title_full High expression of MMP28 indicates unfavorable prognosis in pancreatic cancer
title_fullStr High expression of MMP28 indicates unfavorable prognosis in pancreatic cancer
title_full_unstemmed High expression of MMP28 indicates unfavorable prognosis in pancreatic cancer
title_short High expression of MMP28 indicates unfavorable prognosis in pancreatic cancer
title_sort high expression of mmp28 indicates unfavorable prognosis in pancreatic cancer
topic 3500
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9282082/
https://www.ncbi.nlm.nih.gov/pubmed/33761734
http://dx.doi.org/10.1097/MD.0000000000025320
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