Cargando…
SCG2: A Prognostic Marker That Pinpoints Chemotherapy and Immunotherapy in Colorectal Cancer
BACKGROUND: Fluorouracil (FU)-based chemotherapy regimens are indispensable in the comprehensive treatment of colorectal cancer (CRC). However, the heterogeneity of treated individuals and the severe adverse effects of chemotherapy results in limited overall benefit. METHODS: Firstly, Weighted gene...
Autores principales: | , , , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9283651/ https://www.ncbi.nlm.nih.gov/pubmed/35844556 http://dx.doi.org/10.3389/fimmu.2022.873871 |
_version_ | 1784747371140218880 |
---|---|
author | Weng, Siyuan Liu, Zaoqu Ren, Xiaofeng Xu, Hui Ge, Xiaoyong Ren, Yuqing Zhang, Yuyuan Dang, Qin Liu, Long Guo, Chunguang Beatson, Richard Deng, Jinhai Han, Xinwei |
author_facet | Weng, Siyuan Liu, Zaoqu Ren, Xiaofeng Xu, Hui Ge, Xiaoyong Ren, Yuqing Zhang, Yuyuan Dang, Qin Liu, Long Guo, Chunguang Beatson, Richard Deng, Jinhai Han, Xinwei |
author_sort | Weng, Siyuan |
collection | PubMed |
description | BACKGROUND: Fluorouracil (FU)-based chemotherapy regimens are indispensable in the comprehensive treatment of colorectal cancer (CRC). However, the heterogeneity of treated individuals and the severe adverse effects of chemotherapy results in limited overall benefit. METHODS: Firstly, Weighted gene co-expression network analysis (WGCNA) identified modules tightly associated with chemotherapy response. Then, the in-house cohort and prognostic cohorts from TCGA and GEO were subjected to Cox proportional hazards model and survival analysis to ascertain the predictable function of SCG2 on the prognosis of CRC patients. Finally, we performed In vitro experiments, functional analysis, somatic mutation, and copy number variation research to explore the biological characteristics of SCG2. RESULTS: We identified red and green as the modules most associated with chemotherapy response, in which SCG2 was considered a risky factor with higher expression predicting poorer prognosis. SCG2 expression in the APC non-mutation group was remarkably higher than in the mutation group. The mutation frequencies of amplified genes differed significantly between different SCG2 expression subgroups. Besides, CRC cell lines with SCG2 knockdown have reduced invasive, proliferative, and proliferative capacity. We discovered that the SCG2 high expression subgroup was the immune hot type and considered more suitable for immunotherapy. CONCLUSION: This study demonstrates the clinical significance and biological characteristics of SCG2, which could serve as a promising biomarker to identify patients who may benefit from chemotherapy and immunotherapy. |
format | Online Article Text |
id | pubmed-9283651 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-92836512022-07-16 SCG2: A Prognostic Marker That Pinpoints Chemotherapy and Immunotherapy in Colorectal Cancer Weng, Siyuan Liu, Zaoqu Ren, Xiaofeng Xu, Hui Ge, Xiaoyong Ren, Yuqing Zhang, Yuyuan Dang, Qin Liu, Long Guo, Chunguang Beatson, Richard Deng, Jinhai Han, Xinwei Front Immunol Immunology BACKGROUND: Fluorouracil (FU)-based chemotherapy regimens are indispensable in the comprehensive treatment of colorectal cancer (CRC). However, the heterogeneity of treated individuals and the severe adverse effects of chemotherapy results in limited overall benefit. METHODS: Firstly, Weighted gene co-expression network analysis (WGCNA) identified modules tightly associated with chemotherapy response. Then, the in-house cohort and prognostic cohorts from TCGA and GEO were subjected to Cox proportional hazards model and survival analysis to ascertain the predictable function of SCG2 on the prognosis of CRC patients. Finally, we performed In vitro experiments, functional analysis, somatic mutation, and copy number variation research to explore the biological characteristics of SCG2. RESULTS: We identified red and green as the modules most associated with chemotherapy response, in which SCG2 was considered a risky factor with higher expression predicting poorer prognosis. SCG2 expression in the APC non-mutation group was remarkably higher than in the mutation group. The mutation frequencies of amplified genes differed significantly between different SCG2 expression subgroups. Besides, CRC cell lines with SCG2 knockdown have reduced invasive, proliferative, and proliferative capacity. We discovered that the SCG2 high expression subgroup was the immune hot type and considered more suitable for immunotherapy. CONCLUSION: This study demonstrates the clinical significance and biological characteristics of SCG2, which could serve as a promising biomarker to identify patients who may benefit from chemotherapy and immunotherapy. Frontiers Media S.A. 2022-07-01 /pmc/articles/PMC9283651/ /pubmed/35844556 http://dx.doi.org/10.3389/fimmu.2022.873871 Text en Copyright © 2022 Weng, Liu, Ren, Xu, Ge, Ren, Zhang, Dang, Liu, Guo, Beatson, Deng and Han https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Immunology Weng, Siyuan Liu, Zaoqu Ren, Xiaofeng Xu, Hui Ge, Xiaoyong Ren, Yuqing Zhang, Yuyuan Dang, Qin Liu, Long Guo, Chunguang Beatson, Richard Deng, Jinhai Han, Xinwei SCG2: A Prognostic Marker That Pinpoints Chemotherapy and Immunotherapy in Colorectal Cancer |
title | SCG2: A Prognostic Marker That Pinpoints Chemotherapy and Immunotherapy in Colorectal Cancer |
title_full | SCG2: A Prognostic Marker That Pinpoints Chemotherapy and Immunotherapy in Colorectal Cancer |
title_fullStr | SCG2: A Prognostic Marker That Pinpoints Chemotherapy and Immunotherapy in Colorectal Cancer |
title_full_unstemmed | SCG2: A Prognostic Marker That Pinpoints Chemotherapy and Immunotherapy in Colorectal Cancer |
title_short | SCG2: A Prognostic Marker That Pinpoints Chemotherapy and Immunotherapy in Colorectal Cancer |
title_sort | scg2: a prognostic marker that pinpoints chemotherapy and immunotherapy in colorectal cancer |
topic | Immunology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9283651/ https://www.ncbi.nlm.nih.gov/pubmed/35844556 http://dx.doi.org/10.3389/fimmu.2022.873871 |
work_keys_str_mv | AT wengsiyuan scg2aprognosticmarkerthatpinpointschemotherapyandimmunotherapyincolorectalcancer AT liuzaoqu scg2aprognosticmarkerthatpinpointschemotherapyandimmunotherapyincolorectalcancer AT renxiaofeng scg2aprognosticmarkerthatpinpointschemotherapyandimmunotherapyincolorectalcancer AT xuhui scg2aprognosticmarkerthatpinpointschemotherapyandimmunotherapyincolorectalcancer AT gexiaoyong scg2aprognosticmarkerthatpinpointschemotherapyandimmunotherapyincolorectalcancer AT renyuqing scg2aprognosticmarkerthatpinpointschemotherapyandimmunotherapyincolorectalcancer AT zhangyuyuan scg2aprognosticmarkerthatpinpointschemotherapyandimmunotherapyincolorectalcancer AT dangqin scg2aprognosticmarkerthatpinpointschemotherapyandimmunotherapyincolorectalcancer AT liulong scg2aprognosticmarkerthatpinpointschemotherapyandimmunotherapyincolorectalcancer AT guochunguang scg2aprognosticmarkerthatpinpointschemotherapyandimmunotherapyincolorectalcancer AT beatsonrichard scg2aprognosticmarkerthatpinpointschemotherapyandimmunotherapyincolorectalcancer AT dengjinhai scg2aprognosticmarkerthatpinpointschemotherapyandimmunotherapyincolorectalcancer AT hanxinwei scg2aprognosticmarkerthatpinpointschemotherapyandimmunotherapyincolorectalcancer |