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CACHET-CADB: A Contextualized Ambulatory Electrocardiography Arrhythmia Dataset

ECG is a non-invasive tool for arrhythmia detection. In recent years, wearable ECG-based ambulatory arrhythmia monitoring has gained increasing attention. However, arrhythmia detection algorithms trained on existing public arrhythmia databases show higher FPR when applied to such ambulatory ECG reco...

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Autores principales: Kumar, Devender, Puthusserypady, Sadasivan, Dominguez, Helena, Sharma, Kamal, Bardram, Jakob E.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9283915/
https://www.ncbi.nlm.nih.gov/pubmed/35845039
http://dx.doi.org/10.3389/fcvm.2022.893090
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author Kumar, Devender
Puthusserypady, Sadasivan
Dominguez, Helena
Sharma, Kamal
Bardram, Jakob E.
author_facet Kumar, Devender
Puthusserypady, Sadasivan
Dominguez, Helena
Sharma, Kamal
Bardram, Jakob E.
author_sort Kumar, Devender
collection PubMed
description ECG is a non-invasive tool for arrhythmia detection. In recent years, wearable ECG-based ambulatory arrhythmia monitoring has gained increasing attention. However, arrhythmia detection algorithms trained on existing public arrhythmia databases show higher FPR when applied to such ambulatory ECG recordings. It is primarily because the existing public databases are relatively clean as they are recorded using clinical-grade ECG devices in controlled clinical environments. They may not represent the signal quality and artifacts present in ambulatory patient-operated ECG. To help build and evaluate arrhythmia detection algorithms that can work on wearable ECG from free-living conditions, we present the design and development of the CACHET-CADB, a multi-site contextualized ECG database from free-living conditions. The CACHET-CADB is subpart of the REAFEL study, which aims at reaching the frail elderly patient to optimize the diagnosis of atrial fibrillation. In contrast to the existing databases, along with the ECG, CACHET-CADB also provides the continuous recording of patients' contextual data such as activities, body positions, movement accelerations, symptoms, stress level, and sleep quality. These contextual data can aid in improving the machine/deep learning-based automated arrhythmia detection algorithms on patient-operated wearable ECG. Currently, CACHET-CADB has 259 days of contextualized ECG recordings from 24 patients and 1,602 manually annotated 10 s heart-rhythm samples. The length of the ECG records in the CACHET-CADB varies from 24 h to 3 weeks. The patient's ambulatory context information (activities, movement acceleration, body position, etc.) is extracted for every 10 s interval cumulatively. From the analysis, nearly 11% of the ECG data in the database is found to be noisy. A software toolkit for the use of the CACHET-CADB is also provided.
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spelling pubmed-92839152022-07-16 CACHET-CADB: A Contextualized Ambulatory Electrocardiography Arrhythmia Dataset Kumar, Devender Puthusserypady, Sadasivan Dominguez, Helena Sharma, Kamal Bardram, Jakob E. Front Cardiovasc Med Cardiovascular Medicine ECG is a non-invasive tool for arrhythmia detection. In recent years, wearable ECG-based ambulatory arrhythmia monitoring has gained increasing attention. However, arrhythmia detection algorithms trained on existing public arrhythmia databases show higher FPR when applied to such ambulatory ECG recordings. It is primarily because the existing public databases are relatively clean as they are recorded using clinical-grade ECG devices in controlled clinical environments. They may not represent the signal quality and artifacts present in ambulatory patient-operated ECG. To help build and evaluate arrhythmia detection algorithms that can work on wearable ECG from free-living conditions, we present the design and development of the CACHET-CADB, a multi-site contextualized ECG database from free-living conditions. The CACHET-CADB is subpart of the REAFEL study, which aims at reaching the frail elderly patient to optimize the diagnosis of atrial fibrillation. In contrast to the existing databases, along with the ECG, CACHET-CADB also provides the continuous recording of patients' contextual data such as activities, body positions, movement accelerations, symptoms, stress level, and sleep quality. These contextual data can aid in improving the machine/deep learning-based automated arrhythmia detection algorithms on patient-operated wearable ECG. Currently, CACHET-CADB has 259 days of contextualized ECG recordings from 24 patients and 1,602 manually annotated 10 s heart-rhythm samples. The length of the ECG records in the CACHET-CADB varies from 24 h to 3 weeks. The patient's ambulatory context information (activities, movement acceleration, body position, etc.) is extracted for every 10 s interval cumulatively. From the analysis, nearly 11% of the ECG data in the database is found to be noisy. A software toolkit for the use of the CACHET-CADB is also provided. Frontiers Media S.A. 2022-07-01 /pmc/articles/PMC9283915/ /pubmed/35845039 http://dx.doi.org/10.3389/fcvm.2022.893090 Text en Copyright © 2022 Kumar, Puthusserypady, Dominguez, Sharma and Bardram. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Cardiovascular Medicine
Kumar, Devender
Puthusserypady, Sadasivan
Dominguez, Helena
Sharma, Kamal
Bardram, Jakob E.
CACHET-CADB: A Contextualized Ambulatory Electrocardiography Arrhythmia Dataset
title CACHET-CADB: A Contextualized Ambulatory Electrocardiography Arrhythmia Dataset
title_full CACHET-CADB: A Contextualized Ambulatory Electrocardiography Arrhythmia Dataset
title_fullStr CACHET-CADB: A Contextualized Ambulatory Electrocardiography Arrhythmia Dataset
title_full_unstemmed CACHET-CADB: A Contextualized Ambulatory Electrocardiography Arrhythmia Dataset
title_short CACHET-CADB: A Contextualized Ambulatory Electrocardiography Arrhythmia Dataset
title_sort cachet-cadb: a contextualized ambulatory electrocardiography arrhythmia dataset
topic Cardiovascular Medicine
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9283915/
https://www.ncbi.nlm.nih.gov/pubmed/35845039
http://dx.doi.org/10.3389/fcvm.2022.893090
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