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Influence of genetic substructuring of statistical forensic parameters on genetic short tandem repeat markers in the populations of Southeastern Europe

AIM: To investigate the influence of specific intrapopulation genetic structures on interpopulation relationships. Special focus was the influence of island population isolation on the substructuring of the Croatian population, and the influence of regional population groups on the substructuring of...

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Autores principales: Novokmet, Natalija, Peričić Salihović, Marijana, Škaro, Vedrana, Projić, Petar, Šarac, Jelena, Havaš Auguštin, Dubravka, Rudan, Pavao, Primorac, Dragan, Marjanović, Damir
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Croatian Medical Schools 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9284013/
https://www.ncbi.nlm.nih.gov/pubmed/35722693
http://dx.doi.org/10.3325/cmj.2022.63.244
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author Novokmet, Natalija
Peričić Salihović, Marijana
Škaro, Vedrana
Projić, Petar
Šarac, Jelena
Havaš Auguštin, Dubravka
Rudan, Pavao
Primorac, Dragan
Marjanović, Damir
author_facet Novokmet, Natalija
Peričić Salihović, Marijana
Škaro, Vedrana
Projić, Petar
Šarac, Jelena
Havaš Auguštin, Dubravka
Rudan, Pavao
Primorac, Dragan
Marjanović, Damir
author_sort Novokmet, Natalija
collection PubMed
description AIM: To investigate the influence of specific intrapopulation genetic structures on interpopulation relationships. Special focus was the influence of island population isolation on the substructuring of the Croatian population, and the influence of regional population groups on the substructuring of Southeast European populations. METHODS: Autosomal short tandem repeat (STR) loci were analyzed by using four forensic parameters: matching probability (PM), power of discrimination (PD), power of exclusion (PE), and polymorphic information content (PIC) on a sample of 2877 unrelated participants of both sexes. A sample set comprising 590 participants was analyzed for the first time, and 2287 participants were included from previous studies. The analysis was performed with PowerStats v. 1.2. RESULTS: The analysis of forensic parameters for all nine loci in the Croatian subpopulations showed the largest deviations in the populations of the islands of Korčula and Hvar. The smallest deviations were found in the mainland population. As for Southeast European populations, the largest deviations were found in the population of North Macedonia, followed by Romania, Albanians from Kosovo, and Montenegro, while the smallest deviations were found in the population of Hungary. CONCLUSION: The comparison of forensic parameters between different subpopulations of Croatia and Southeast Europe indicates that the isolation of individual Croatian subpopulations and rare alleles in their gene pool affect the values of forensic parameters. Specific features of (sub)populations should be taken into account for appropriate sampling of the total population when creating a DNA database of STR markers.
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spelling pubmed-92840132022-07-29 Influence of genetic substructuring of statistical forensic parameters on genetic short tandem repeat markers in the populations of Southeastern Europe Novokmet, Natalija Peričić Salihović, Marijana Škaro, Vedrana Projić, Petar Šarac, Jelena Havaš Auguštin, Dubravka Rudan, Pavao Primorac, Dragan Marjanović, Damir Croat Med J Research Article AIM: To investigate the influence of specific intrapopulation genetic structures on interpopulation relationships. Special focus was the influence of island population isolation on the substructuring of the Croatian population, and the influence of regional population groups on the substructuring of Southeast European populations. METHODS: Autosomal short tandem repeat (STR) loci were analyzed by using four forensic parameters: matching probability (PM), power of discrimination (PD), power of exclusion (PE), and polymorphic information content (PIC) on a sample of 2877 unrelated participants of both sexes. A sample set comprising 590 participants was analyzed for the first time, and 2287 participants were included from previous studies. The analysis was performed with PowerStats v. 1.2. RESULTS: The analysis of forensic parameters for all nine loci in the Croatian subpopulations showed the largest deviations in the populations of the islands of Korčula and Hvar. The smallest deviations were found in the mainland population. As for Southeast European populations, the largest deviations were found in the population of North Macedonia, followed by Romania, Albanians from Kosovo, and Montenegro, while the smallest deviations were found in the population of Hungary. CONCLUSION: The comparison of forensic parameters between different subpopulations of Croatia and Southeast Europe indicates that the isolation of individual Croatian subpopulations and rare alleles in their gene pool affect the values of forensic parameters. Specific features of (sub)populations should be taken into account for appropriate sampling of the total population when creating a DNA database of STR markers. Croatian Medical Schools 2022-06 /pmc/articles/PMC9284013/ /pubmed/35722693 http://dx.doi.org/10.3325/cmj.2022.63.244 Text en Copyright © 2022 by the Croatian Medical Journal. All rights reserved. https://creativecommons.org/licenses/by/2.5/This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Novokmet, Natalija
Peričić Salihović, Marijana
Škaro, Vedrana
Projić, Petar
Šarac, Jelena
Havaš Auguštin, Dubravka
Rudan, Pavao
Primorac, Dragan
Marjanović, Damir
Influence of genetic substructuring of statistical forensic parameters on genetic short tandem repeat markers in the populations of Southeastern Europe
title Influence of genetic substructuring of statistical forensic parameters on genetic short tandem repeat markers in the populations of Southeastern Europe
title_full Influence of genetic substructuring of statistical forensic parameters on genetic short tandem repeat markers in the populations of Southeastern Europe
title_fullStr Influence of genetic substructuring of statistical forensic parameters on genetic short tandem repeat markers in the populations of Southeastern Europe
title_full_unstemmed Influence of genetic substructuring of statistical forensic parameters on genetic short tandem repeat markers in the populations of Southeastern Europe
title_short Influence of genetic substructuring of statistical forensic parameters on genetic short tandem repeat markers in the populations of Southeastern Europe
title_sort influence of genetic substructuring of statistical forensic parameters on genetic short tandem repeat markers in the populations of southeastern europe
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9284013/
https://www.ncbi.nlm.nih.gov/pubmed/35722693
http://dx.doi.org/10.3325/cmj.2022.63.244
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