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motilitAI: A machine learning framework for automatic prediction of human sperm motility

In this article, human semen samples from the Visem dataset are automatically assessed with machine learning methods for their quality with respect to sperm motility. Several regression models are trained to automatically predict the percentage (0–100) of progressive, non-progressive, and immotile s...

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Detalles Bibliográficos
Autores principales: Ottl, Sandra, Amiriparian, Shahin, Gerczuk, Maurice, Schuller, Björn W.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9287611/
https://www.ncbi.nlm.nih.gov/pubmed/35856034
http://dx.doi.org/10.1016/j.isci.2022.104644
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author Ottl, Sandra
Amiriparian, Shahin
Gerczuk, Maurice
Schuller, Björn W.
author_facet Ottl, Sandra
Amiriparian, Shahin
Gerczuk, Maurice
Schuller, Björn W.
author_sort Ottl, Sandra
collection PubMed
description In this article, human semen samples from the Visem dataset are automatically assessed with machine learning methods for their quality with respect to sperm motility. Several regression models are trained to automatically predict the percentage (0–100) of progressive, non-progressive, and immotile spermatozoa. The videos are adopted for unsupervised tracking and two different feature extraction methods—in particular custom movement statistics and displacement features. We train multiple neural networks and support vector regression models on the extracted features. Best results are achieved using a linear Support Vector Regressor with an aggregated and quantized representation of individual displacement features of each sperm cell. Compared to the best submission of the Medico Multimedia for Medicine challenge, which used the same dataset and splits, the mean absolute error (MAE) could be reduced from 8.83 to 7.31. We provide the source code for our experiments on GitHub (Code available at: https://github.com/EIHW/motilitAI).
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spelling pubmed-92876112022-07-17 motilitAI: A machine learning framework for automatic prediction of human sperm motility Ottl, Sandra Amiriparian, Shahin Gerczuk, Maurice Schuller, Björn W. iScience Article In this article, human semen samples from the Visem dataset are automatically assessed with machine learning methods for their quality with respect to sperm motility. Several regression models are trained to automatically predict the percentage (0–100) of progressive, non-progressive, and immotile spermatozoa. The videos are adopted for unsupervised tracking and two different feature extraction methods—in particular custom movement statistics and displacement features. We train multiple neural networks and support vector regression models on the extracted features. Best results are achieved using a linear Support Vector Regressor with an aggregated and quantized representation of individual displacement features of each sperm cell. Compared to the best submission of the Medico Multimedia for Medicine challenge, which used the same dataset and splits, the mean absolute error (MAE) could be reduced from 8.83 to 7.31. We provide the source code for our experiments on GitHub (Code available at: https://github.com/EIHW/motilitAI). Elsevier 2022-06-20 /pmc/articles/PMC9287611/ /pubmed/35856034 http://dx.doi.org/10.1016/j.isci.2022.104644 Text en © 2022. https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Article
Ottl, Sandra
Amiriparian, Shahin
Gerczuk, Maurice
Schuller, Björn W.
motilitAI: A machine learning framework for automatic prediction of human sperm motility
title motilitAI: A machine learning framework for automatic prediction of human sperm motility
title_full motilitAI: A machine learning framework for automatic prediction of human sperm motility
title_fullStr motilitAI: A machine learning framework for automatic prediction of human sperm motility
title_full_unstemmed motilitAI: A machine learning framework for automatic prediction of human sperm motility
title_short motilitAI: A machine learning framework for automatic prediction of human sperm motility
title_sort motilitai: a machine learning framework for automatic prediction of human sperm motility
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9287611/
https://www.ncbi.nlm.nih.gov/pubmed/35856034
http://dx.doi.org/10.1016/j.isci.2022.104644
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