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Characterization of Genomic Alterations in Colorectal Liver Metastasis and Their Prognostic Value
Colorectal liver metastases (CRLMs) are clinically heterogeneous lesions with poor prognosis. Genetic alterations play a crucial role in their progression. The traditional Fong clinical risk score (Fong-CRS) is commonly used for risk stratification and prognosis prediction. By identifying the genomi...
Autores principales: | , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Frontiers Media S.A.
2022
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9289210/ https://www.ncbi.nlm.nih.gov/pubmed/35860598 http://dx.doi.org/10.3389/fcell.2021.760618 |
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author | Bao, Xuanwen Wang, Kun Liu, Ming Li, Bin Wang, Hongwei Jin, Kemin Yan, Xiaoluan Zhang, Hangyu Bao, Quan Xu, Da Wang, Lijun Liu, Wei Wang, Yanyan Li, Juan Liu, Lijuan Fang, Weijia Xing, Baocai |
author_facet | Bao, Xuanwen Wang, Kun Liu, Ming Li, Bin Wang, Hongwei Jin, Kemin Yan, Xiaoluan Zhang, Hangyu Bao, Quan Xu, Da Wang, Lijun Liu, Wei Wang, Yanyan Li, Juan Liu, Lijuan Fang, Weijia Xing, Baocai |
author_sort | Bao, Xuanwen |
collection | PubMed |
description | Colorectal liver metastases (CRLMs) are clinically heterogeneous lesions with poor prognosis. Genetic alterations play a crucial role in their progression. The traditional Fong clinical risk score (Fong-CRS) is commonly used for risk stratification and prognosis prediction. By identifying the genomic alterations of CRLMs, we aimed to develop a mutation-based gene-signature-based clinical score (mut-CS) system to improve clinical prognostication. Tumour tissues from 144 patients with CRLMs were analysed with next-generation sequencing (NGS). A mut-CS scoring system considering the unique mutation-based gene signature, primary site, and Fong-CRS was developed and could identify CRLM patients with poor prognosis. The mean time-dependent receiver operating characteristic curve AUC value of the mut-CS system was greater than that of previously established scoring measures (the Fong-CRS, the e-clinical score, the presence of concomitant RAS and TP53 mutations, and other clinical traits). Taking together, we identified a mutant signature that exhibits a strong prognostic effect for CRLMs. Traditional clinical scoring system characteristics were incorporated into the new mut-CS scoring system to help determine the appropriate treatment for CRLMs. |
format | Online Article Text |
id | pubmed-9289210 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-92892102022-07-19 Characterization of Genomic Alterations in Colorectal Liver Metastasis and Their Prognostic Value Bao, Xuanwen Wang, Kun Liu, Ming Li, Bin Wang, Hongwei Jin, Kemin Yan, Xiaoluan Zhang, Hangyu Bao, Quan Xu, Da Wang, Lijun Liu, Wei Wang, Yanyan Li, Juan Liu, Lijuan Fang, Weijia Xing, Baocai Front Cell Dev Biol Cell and Developmental Biology Colorectal liver metastases (CRLMs) are clinically heterogeneous lesions with poor prognosis. Genetic alterations play a crucial role in their progression. The traditional Fong clinical risk score (Fong-CRS) is commonly used for risk stratification and prognosis prediction. By identifying the genomic alterations of CRLMs, we aimed to develop a mutation-based gene-signature-based clinical score (mut-CS) system to improve clinical prognostication. Tumour tissues from 144 patients with CRLMs were analysed with next-generation sequencing (NGS). A mut-CS scoring system considering the unique mutation-based gene signature, primary site, and Fong-CRS was developed and could identify CRLM patients with poor prognosis. The mean time-dependent receiver operating characteristic curve AUC value of the mut-CS system was greater than that of previously established scoring measures (the Fong-CRS, the e-clinical score, the presence of concomitant RAS and TP53 mutations, and other clinical traits). Taking together, we identified a mutant signature that exhibits a strong prognostic effect for CRLMs. Traditional clinical scoring system characteristics were incorporated into the new mut-CS scoring system to help determine the appropriate treatment for CRLMs. Frontiers Media S.A. 2022-07-04 /pmc/articles/PMC9289210/ /pubmed/35860598 http://dx.doi.org/10.3389/fcell.2021.760618 Text en Copyright © 2022 Bao, Wang, Liu, Li, Wang, Jin, Yan, Zhang, Bao, Xu, Wang, Liu, Wang, Li, Liu, Fang and Xing. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Cell and Developmental Biology Bao, Xuanwen Wang, Kun Liu, Ming Li, Bin Wang, Hongwei Jin, Kemin Yan, Xiaoluan Zhang, Hangyu Bao, Quan Xu, Da Wang, Lijun Liu, Wei Wang, Yanyan Li, Juan Liu, Lijuan Fang, Weijia Xing, Baocai Characterization of Genomic Alterations in Colorectal Liver Metastasis and Their Prognostic Value |
title | Characterization of Genomic Alterations in Colorectal Liver Metastasis and Their Prognostic Value |
title_full | Characterization of Genomic Alterations in Colorectal Liver Metastasis and Their Prognostic Value |
title_fullStr | Characterization of Genomic Alterations in Colorectal Liver Metastasis and Their Prognostic Value |
title_full_unstemmed | Characterization of Genomic Alterations in Colorectal Liver Metastasis and Their Prognostic Value |
title_short | Characterization of Genomic Alterations in Colorectal Liver Metastasis and Their Prognostic Value |
title_sort | characterization of genomic alterations in colorectal liver metastasis and their prognostic value |
topic | Cell and Developmental Biology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9289210/ https://www.ncbi.nlm.nih.gov/pubmed/35860598 http://dx.doi.org/10.3389/fcell.2021.760618 |
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