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Auto-Segmentation Ultrasound-Based Radiomics Technology to Stratify Patient With Diabetic Kidney Disease: A Multi-Center Retrospective Study
BACKGROUND: An increasing proportion of patients with diabetic kidney disease (DKD) has been observed among incident hemodialysis patients in large cities, which is consistent with the continuous growth of diabetes in the past 20 years. PURPOSE: In this multicenter retrospective study, we developed...
Autores principales: | , , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9290767/ https://www.ncbi.nlm.nih.gov/pubmed/35860551 http://dx.doi.org/10.3389/fonc.2022.876967 |
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author | Chen, Jifan Jin, Peile Song, Yue Feng, Liting Lu, Jiayue Chen, Hongjian Xin, Lei Qiu, Fuqiang Cong, Zhang Shen, Jiaxin Zhao, Yanan Xu, Wen Cai, Chenxi Zhou, Yan Yang, Jinfeng Zhang, Chao Chen, Qin Jing, Xiang Huang, Pintong |
author_facet | Chen, Jifan Jin, Peile Song, Yue Feng, Liting Lu, Jiayue Chen, Hongjian Xin, Lei Qiu, Fuqiang Cong, Zhang Shen, Jiaxin Zhao, Yanan Xu, Wen Cai, Chenxi Zhou, Yan Yang, Jinfeng Zhang, Chao Chen, Qin Jing, Xiang Huang, Pintong |
author_sort | Chen, Jifan |
collection | PubMed |
description | BACKGROUND: An increasing proportion of patients with diabetic kidney disease (DKD) has been observed among incident hemodialysis patients in large cities, which is consistent with the continuous growth of diabetes in the past 20 years. PURPOSE: In this multicenter retrospective study, we developed a deep learning (DL)-based automatic segmentation and radiomics technology to stratify patients with DKD and evaluate the possibility of clinical application across centers. MATERIALS AND METHODS: The research participants were enrolled retrospectively and separated into three parts: training, validation, and independent test datasets for further analysis. DeepLabV3+ network, PyRadiomics package, and least absolute shrinkage and selection operator were used for segmentation, extraction of radiomics variables, and regression, respectively. RESULTS: A total of 499 patients from three centers were enrolled in this study including 246 patients with type II diabetes mellitus (T2DM) and 253 patients with DKD. The mean intersection-over-union (Miou) and mean pixel accuracy (mPA) of automatic segmentation of the data from the three medical centers were 0.812 ± 0.003, 0.781 ± 0.009, 0.805 ± 0.020 and 0.890 ± 0.004, 0.870 ± 0.002, 0.893 ± 0.007, respectively. The variables from the renal parenchyma and sinus provided different information for the diagnosis and follow-up of DKD. The area under the curve (AUC) of the radiomics model for differentiating between DKD and T2DM patients was 0.674 ± 0.074 and for differentiating between the high and low stages of DKD was 0.803 ± 0.037. CONCLUSION: In this study, we developed a DL-based automatic segmentation, radiomics technology to stratify patients with DKD. The DL technology was proposed to achieve fast and accurate anatomical-level segmentation in the kidney, and an ultrasound-based radiomics model can achieve high diagnostic performance in the diagnosis and follow-up of patients with DKD. |
format | Online Article Text |
id | pubmed-9290767 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-92907672022-07-19 Auto-Segmentation Ultrasound-Based Radiomics Technology to Stratify Patient With Diabetic Kidney Disease: A Multi-Center Retrospective Study Chen, Jifan Jin, Peile Song, Yue Feng, Liting Lu, Jiayue Chen, Hongjian Xin, Lei Qiu, Fuqiang Cong, Zhang Shen, Jiaxin Zhao, Yanan Xu, Wen Cai, Chenxi Zhou, Yan Yang, Jinfeng Zhang, Chao Chen, Qin Jing, Xiang Huang, Pintong Front Oncol Oncology BACKGROUND: An increasing proportion of patients with diabetic kidney disease (DKD) has been observed among incident hemodialysis patients in large cities, which is consistent with the continuous growth of diabetes in the past 20 years. PURPOSE: In this multicenter retrospective study, we developed a deep learning (DL)-based automatic segmentation and radiomics technology to stratify patients with DKD and evaluate the possibility of clinical application across centers. MATERIALS AND METHODS: The research participants were enrolled retrospectively and separated into three parts: training, validation, and independent test datasets for further analysis. DeepLabV3+ network, PyRadiomics package, and least absolute shrinkage and selection operator were used for segmentation, extraction of radiomics variables, and regression, respectively. RESULTS: A total of 499 patients from three centers were enrolled in this study including 246 patients with type II diabetes mellitus (T2DM) and 253 patients with DKD. The mean intersection-over-union (Miou) and mean pixel accuracy (mPA) of automatic segmentation of the data from the three medical centers were 0.812 ± 0.003, 0.781 ± 0.009, 0.805 ± 0.020 and 0.890 ± 0.004, 0.870 ± 0.002, 0.893 ± 0.007, respectively. The variables from the renal parenchyma and sinus provided different information for the diagnosis and follow-up of DKD. The area under the curve (AUC) of the radiomics model for differentiating between DKD and T2DM patients was 0.674 ± 0.074 and for differentiating between the high and low stages of DKD was 0.803 ± 0.037. CONCLUSION: In this study, we developed a DL-based automatic segmentation, radiomics technology to stratify patients with DKD. The DL technology was proposed to achieve fast and accurate anatomical-level segmentation in the kidney, and an ultrasound-based radiomics model can achieve high diagnostic performance in the diagnosis and follow-up of patients with DKD. Frontiers Media S.A. 2022-07-04 /pmc/articles/PMC9290767/ /pubmed/35860551 http://dx.doi.org/10.3389/fonc.2022.876967 Text en Copyright © 2022 Chen, Jin, Song, Feng, Lu, Chen, Xin, Qiu, Cong, Shen, Zhao, Xu, Cai, Zhou, Yang, Zhang, Chen, Jing and Huang https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Oncology Chen, Jifan Jin, Peile Song, Yue Feng, Liting Lu, Jiayue Chen, Hongjian Xin, Lei Qiu, Fuqiang Cong, Zhang Shen, Jiaxin Zhao, Yanan Xu, Wen Cai, Chenxi Zhou, Yan Yang, Jinfeng Zhang, Chao Chen, Qin Jing, Xiang Huang, Pintong Auto-Segmentation Ultrasound-Based Radiomics Technology to Stratify Patient With Diabetic Kidney Disease: A Multi-Center Retrospective Study |
title | Auto-Segmentation Ultrasound-Based Radiomics Technology to Stratify Patient With Diabetic Kidney Disease: A Multi-Center Retrospective Study |
title_full | Auto-Segmentation Ultrasound-Based Radiomics Technology to Stratify Patient With Diabetic Kidney Disease: A Multi-Center Retrospective Study |
title_fullStr | Auto-Segmentation Ultrasound-Based Radiomics Technology to Stratify Patient With Diabetic Kidney Disease: A Multi-Center Retrospective Study |
title_full_unstemmed | Auto-Segmentation Ultrasound-Based Radiomics Technology to Stratify Patient With Diabetic Kidney Disease: A Multi-Center Retrospective Study |
title_short | Auto-Segmentation Ultrasound-Based Radiomics Technology to Stratify Patient With Diabetic Kidney Disease: A Multi-Center Retrospective Study |
title_sort | auto-segmentation ultrasound-based radiomics technology to stratify patient with diabetic kidney disease: a multi-center retrospective study |
topic | Oncology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9290767/ https://www.ncbi.nlm.nih.gov/pubmed/35860551 http://dx.doi.org/10.3389/fonc.2022.876967 |
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