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Disrupted myelination network in the cingulate cortex of Parkinson's disease

The cingulate cortex is part of the conserved limbic system, which is considered as a hub of emotional and cognitive control. Accumulating evidence suggested that involvement of the cingulate cortex is significant for cognitive impairment of Parkinson's disease (PD). However, mechanistic studie...

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Autores principales: Xie, Song, Yang, Jiajun, Huang, Shenghui, Fan, Yuanlan, Xu, Tao, He, Jiangshuang, Guo, Jiahao, Ji, Xiang, Wang, Zhibo, Li, Peijun, Chen, Jiangfan, Zhang, Yi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9290774/
https://www.ncbi.nlm.nih.gov/pubmed/35394697
http://dx.doi.org/10.1049/syb2.12043
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author Xie, Song
Yang, Jiajun
Huang, Shenghui
Fan, Yuanlan
Xu, Tao
He, Jiangshuang
Guo, Jiahao
Ji, Xiang
Wang, Zhibo
Li, Peijun
Chen, Jiangfan
Zhang, Yi
author_facet Xie, Song
Yang, Jiajun
Huang, Shenghui
Fan, Yuanlan
Xu, Tao
He, Jiangshuang
Guo, Jiahao
Ji, Xiang
Wang, Zhibo
Li, Peijun
Chen, Jiangfan
Zhang, Yi
author_sort Xie, Song
collection PubMed
description The cingulate cortex is part of the conserved limbic system, which is considered as a hub of emotional and cognitive control. Accumulating evidence suggested that involvement of the cingulate cortex is significant for cognitive impairment of Parkinson's disease (PD). However, mechanistic studies of the cingulate cortex in PD pathogenesis are limited. Here, transcriptomic and regulatory network analyses were conducted for the cingulate cortex in PD. Enrichment and clustering analyses showed that genes involved in regulation of membrane potential and glutamate receptor signalling pathway were upregulated. Importantly, myelin genes and the oligodendrocyte development pathways were markedly downregulated, indicating disrupted myelination in PD cingulate cortex. Cell‐type‐specific signatures revealed that myelinating oligodendrocytes were the major cell type damaged in the PD cingulate cortex. Furthermore, downregulation of myelination pathways in the cingulate cortex were shared and validated in another independent RNAseq cohort of dementia with Lewy bodies (DLB). In combination with ATACseq data, gene regulatory networks (GRNs) were further constructed for 32 transcription factors (TFs) and 466 target genes among differentially expressed genes (DEGs) using a tree‐based machine learning algorithm. Several transcription factors, including Olig2, Sox8, Sox10, E2F1, and NKX6‐2, were highlighted as key nodes in a sub‐network, which control many overlapping downstream targets associated with myelin formation and gliogenesis. In addition, the authors have validated a subset of DEGs by qPCRs in two PD mouse models. Notably, seven of these genes,TOX3, NECAB2 NOS1, CAPN3, NR4A2, E2F1 and FOXP2, have been implicated previously in PD or neurodegeneration and are worthy of further studies as novel candidate genes. Together, our findings provide new insights into the role of remyelination as a promising new approach to treat PD after demyelination.
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spelling pubmed-92907742022-07-20 Disrupted myelination network in the cingulate cortex of Parkinson's disease Xie, Song Yang, Jiajun Huang, Shenghui Fan, Yuanlan Xu, Tao He, Jiangshuang Guo, Jiahao Ji, Xiang Wang, Zhibo Li, Peijun Chen, Jiangfan Zhang, Yi IET Syst Biol Original Research The cingulate cortex is part of the conserved limbic system, which is considered as a hub of emotional and cognitive control. Accumulating evidence suggested that involvement of the cingulate cortex is significant for cognitive impairment of Parkinson's disease (PD). However, mechanistic studies of the cingulate cortex in PD pathogenesis are limited. Here, transcriptomic and regulatory network analyses were conducted for the cingulate cortex in PD. Enrichment and clustering analyses showed that genes involved in regulation of membrane potential and glutamate receptor signalling pathway were upregulated. Importantly, myelin genes and the oligodendrocyte development pathways were markedly downregulated, indicating disrupted myelination in PD cingulate cortex. Cell‐type‐specific signatures revealed that myelinating oligodendrocytes were the major cell type damaged in the PD cingulate cortex. Furthermore, downregulation of myelination pathways in the cingulate cortex were shared and validated in another independent RNAseq cohort of dementia with Lewy bodies (DLB). In combination with ATACseq data, gene regulatory networks (GRNs) were further constructed for 32 transcription factors (TFs) and 466 target genes among differentially expressed genes (DEGs) using a tree‐based machine learning algorithm. Several transcription factors, including Olig2, Sox8, Sox10, E2F1, and NKX6‐2, were highlighted as key nodes in a sub‐network, which control many overlapping downstream targets associated with myelin formation and gliogenesis. In addition, the authors have validated a subset of DEGs by qPCRs in two PD mouse models. Notably, seven of these genes,TOX3, NECAB2 NOS1, CAPN3, NR4A2, E2F1 and FOXP2, have been implicated previously in PD or neurodegeneration and are worthy of further studies as novel candidate genes. Together, our findings provide new insights into the role of remyelination as a promising new approach to treat PD after demyelination. John Wiley and Sons Inc. 2022-04-08 /pmc/articles/PMC9290774/ /pubmed/35394697 http://dx.doi.org/10.1049/syb2.12043 Text en © 2022 The Authors. IET Systems Biology published by John Wiley & Sons Ltd on behalf of The Institution of Engineering and Technology. https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc-nd/4.0/ (https://creativecommons.org/licenses/by-nc-nd/4.0/) License, which permits use and distribution in any medium, provided the original work is properly cited, the use is non‐commercial and no modifications or adaptations are made.
spellingShingle Original Research
Xie, Song
Yang, Jiajun
Huang, Shenghui
Fan, Yuanlan
Xu, Tao
He, Jiangshuang
Guo, Jiahao
Ji, Xiang
Wang, Zhibo
Li, Peijun
Chen, Jiangfan
Zhang, Yi
Disrupted myelination network in the cingulate cortex of Parkinson's disease
title Disrupted myelination network in the cingulate cortex of Parkinson's disease
title_full Disrupted myelination network in the cingulate cortex of Parkinson's disease
title_fullStr Disrupted myelination network in the cingulate cortex of Parkinson's disease
title_full_unstemmed Disrupted myelination network in the cingulate cortex of Parkinson's disease
title_short Disrupted myelination network in the cingulate cortex of Parkinson's disease
title_sort disrupted myelination network in the cingulate cortex of parkinson's disease
topic Original Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9290774/
https://www.ncbi.nlm.nih.gov/pubmed/35394697
http://dx.doi.org/10.1049/syb2.12043
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