Cargando…
Validation of inducible basophil biomarkers: Time, temperature and transportation
BACKGROUND: The short stability window of several hours from blood collection to measuring basophil activation has limited the use of flow cytometry‐based basophil activation assays in clinical settings. We examine if it is possible to extend this window to 1 day allowing for shipment of samples bet...
Autores principales: | , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley & Sons, Inc.
2021
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9291082/ https://www.ncbi.nlm.nih.gov/pubmed/33539657 http://dx.doi.org/10.1002/cyto.b.21991 |
_version_ | 1784749060224188416 |
---|---|
author | Kim, Theodore Yu, Jing Li, Henry Scarupa, Mark Wasserman, Richard L. Economides, Athena White, Martha Ward, Carla Shah, Atul Jones, Douglas Rathkopf, Melinda Frye, Kelly Aybar, Ahmet Shayegan, Shahrooz Enav, Benjamin Ispas, Laura Loizou, Denise Fitzhugh, David Tracy, James Friedlander, James Jacobs, Zachary Matz, Jonathan Golden, David McNeil, Donald McCann, William Copenhaver, Christopher Factor, Jeffrey Gupta, Raavi Alpan, Oral Plassmeyer, Matthew Sønder, Søren Ulrik |
author_facet | Kim, Theodore Yu, Jing Li, Henry Scarupa, Mark Wasserman, Richard L. Economides, Athena White, Martha Ward, Carla Shah, Atul Jones, Douglas Rathkopf, Melinda Frye, Kelly Aybar, Ahmet Shayegan, Shahrooz Enav, Benjamin Ispas, Laura Loizou, Denise Fitzhugh, David Tracy, James Friedlander, James Jacobs, Zachary Matz, Jonathan Golden, David McNeil, Donald McCann, William Copenhaver, Christopher Factor, Jeffrey Gupta, Raavi Alpan, Oral Plassmeyer, Matthew Sønder, Søren Ulrik |
author_sort | Kim, Theodore |
collection | PubMed |
description | BACKGROUND: The short stability window of several hours from blood collection to measuring basophil activation has limited the use of flow cytometry‐based basophil activation assays in clinical settings. We examine if it is possible to extend this window to 1 day allowing for shipment of samples between laboratories. Several options exist for reporting the results including reporting all the measured values directly, calculating ratios and reporting a single value covering all measured results. Each of these options have different stability and value to the physician. METHODS: Whole blood samples from peanut allergic patients were stimulated with four different peanut concentrations at Day 0, Day 1, and Day 2. Samples were stored under temperature‐controlled conditions. Flow cytometry was used to analyze the samples. The basophil activation and degranulation were measured as percentage of positive CD63 basophils and CD203c MFI fold change. Shipped samples were transported under ambient conditions. RESULTS: The results show that CD63 is a stable marker at Day 1. The CD203c ratio decreases significantly at Day 1. Calculating the CD63/IgE ratio proves to be more stable than CD63 alone. The most stable readouts are the semi‐quantitative results and the trajectory of the dose response curve. Finally, we confirmed that the stability can be extended to samples shipped overnight to the laboratory. CONCLUSIONS: It is possible to extend the stability of the basophil activation assay to 1 day for samples stored at 18–25°C as well as samples shipped under ambient conditions as long as the temperature is within the 2–37°C range. |
format | Online Article Text |
id | pubmed-9291082 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | John Wiley & Sons, Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-92910822022-07-20 Validation of inducible basophil biomarkers: Time, temperature and transportation Kim, Theodore Yu, Jing Li, Henry Scarupa, Mark Wasserman, Richard L. Economides, Athena White, Martha Ward, Carla Shah, Atul Jones, Douglas Rathkopf, Melinda Frye, Kelly Aybar, Ahmet Shayegan, Shahrooz Enav, Benjamin Ispas, Laura Loizou, Denise Fitzhugh, David Tracy, James Friedlander, James Jacobs, Zachary Matz, Jonathan Golden, David McNeil, Donald McCann, William Copenhaver, Christopher Factor, Jeffrey Gupta, Raavi Alpan, Oral Plassmeyer, Matthew Sønder, Søren Ulrik Cytometry B Clin Cytom Original Articles BACKGROUND: The short stability window of several hours from blood collection to measuring basophil activation has limited the use of flow cytometry‐based basophil activation assays in clinical settings. We examine if it is possible to extend this window to 1 day allowing for shipment of samples between laboratories. Several options exist for reporting the results including reporting all the measured values directly, calculating ratios and reporting a single value covering all measured results. Each of these options have different stability and value to the physician. METHODS: Whole blood samples from peanut allergic patients were stimulated with four different peanut concentrations at Day 0, Day 1, and Day 2. Samples were stored under temperature‐controlled conditions. Flow cytometry was used to analyze the samples. The basophil activation and degranulation were measured as percentage of positive CD63 basophils and CD203c MFI fold change. Shipped samples were transported under ambient conditions. RESULTS: The results show that CD63 is a stable marker at Day 1. The CD203c ratio decreases significantly at Day 1. Calculating the CD63/IgE ratio proves to be more stable than CD63 alone. The most stable readouts are the semi‐quantitative results and the trajectory of the dose response curve. Finally, we confirmed that the stability can be extended to samples shipped overnight to the laboratory. CONCLUSIONS: It is possible to extend the stability of the basophil activation assay to 1 day for samples stored at 18–25°C as well as samples shipped under ambient conditions as long as the temperature is within the 2–37°C range. John Wiley & Sons, Inc. 2021-02-04 2021-11 /pmc/articles/PMC9291082/ /pubmed/33539657 http://dx.doi.org/10.1002/cyto.b.21991 Text en © 2021 The Authors. Cytometry Part B: Clinical Cytometry published by Wiley Periodicals LLC on behalf of International Clinical Cytometry Society. https://creativecommons.org/licenses/by-nc/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited and is not used for commercial purposes. |
spellingShingle | Original Articles Kim, Theodore Yu, Jing Li, Henry Scarupa, Mark Wasserman, Richard L. Economides, Athena White, Martha Ward, Carla Shah, Atul Jones, Douglas Rathkopf, Melinda Frye, Kelly Aybar, Ahmet Shayegan, Shahrooz Enav, Benjamin Ispas, Laura Loizou, Denise Fitzhugh, David Tracy, James Friedlander, James Jacobs, Zachary Matz, Jonathan Golden, David McNeil, Donald McCann, William Copenhaver, Christopher Factor, Jeffrey Gupta, Raavi Alpan, Oral Plassmeyer, Matthew Sønder, Søren Ulrik Validation of inducible basophil biomarkers: Time, temperature and transportation |
title | Validation of inducible basophil biomarkers: Time, temperature and transportation |
title_full | Validation of inducible basophil biomarkers: Time, temperature and transportation |
title_fullStr | Validation of inducible basophil biomarkers: Time, temperature and transportation |
title_full_unstemmed | Validation of inducible basophil biomarkers: Time, temperature and transportation |
title_short | Validation of inducible basophil biomarkers: Time, temperature and transportation |
title_sort | validation of inducible basophil biomarkers: time, temperature and transportation |
topic | Original Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9291082/ https://www.ncbi.nlm.nih.gov/pubmed/33539657 http://dx.doi.org/10.1002/cyto.b.21991 |
work_keys_str_mv | AT kimtheodore validationofinduciblebasophilbiomarkerstimetemperatureandtransportation AT yujing validationofinduciblebasophilbiomarkerstimetemperatureandtransportation AT lihenry validationofinduciblebasophilbiomarkerstimetemperatureandtransportation AT scarupamark validationofinduciblebasophilbiomarkerstimetemperatureandtransportation AT wassermanrichardl validationofinduciblebasophilbiomarkerstimetemperatureandtransportation AT economidesathena validationofinduciblebasophilbiomarkerstimetemperatureandtransportation AT whitemartha validationofinduciblebasophilbiomarkerstimetemperatureandtransportation AT wardcarla validationofinduciblebasophilbiomarkerstimetemperatureandtransportation AT shahatul validationofinduciblebasophilbiomarkerstimetemperatureandtransportation AT jonesdouglas validationofinduciblebasophilbiomarkerstimetemperatureandtransportation AT rathkopfmelinda validationofinduciblebasophilbiomarkerstimetemperatureandtransportation AT fryekelly validationofinduciblebasophilbiomarkerstimetemperatureandtransportation AT aybarahmet validationofinduciblebasophilbiomarkerstimetemperatureandtransportation AT shayeganshahrooz validationofinduciblebasophilbiomarkerstimetemperatureandtransportation AT enavbenjamin validationofinduciblebasophilbiomarkerstimetemperatureandtransportation AT ispaslaura validationofinduciblebasophilbiomarkerstimetemperatureandtransportation AT loizoudenise validationofinduciblebasophilbiomarkerstimetemperatureandtransportation AT fitzhughdavid validationofinduciblebasophilbiomarkerstimetemperatureandtransportation AT tracyjames validationofinduciblebasophilbiomarkerstimetemperatureandtransportation AT friedlanderjames validationofinduciblebasophilbiomarkerstimetemperatureandtransportation AT jacobszachary validationofinduciblebasophilbiomarkerstimetemperatureandtransportation AT matzjonathan validationofinduciblebasophilbiomarkerstimetemperatureandtransportation AT goldendavid validationofinduciblebasophilbiomarkerstimetemperatureandtransportation AT mcneildonald validationofinduciblebasophilbiomarkerstimetemperatureandtransportation AT mccannwilliam validationofinduciblebasophilbiomarkerstimetemperatureandtransportation AT copenhaverchristopher validationofinduciblebasophilbiomarkerstimetemperatureandtransportation AT factorjeffrey validationofinduciblebasophilbiomarkerstimetemperatureandtransportation AT guptaraavi validationofinduciblebasophilbiomarkerstimetemperatureandtransportation AT alpanoral validationofinduciblebasophilbiomarkerstimetemperatureandtransportation AT plassmeyermatthew validationofinduciblebasophilbiomarkerstimetemperatureandtransportation AT søndersørenulrik validationofinduciblebasophilbiomarkerstimetemperatureandtransportation |