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Validation of inducible basophil biomarkers: Time, temperature and transportation

BACKGROUND: The short stability window of several hours from blood collection to measuring basophil activation has limited the use of flow cytometry‐based basophil activation assays in clinical settings. We examine if it is possible to extend this window to 1 day allowing for shipment of samples bet...

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Autores principales: Kim, Theodore, Yu, Jing, Li, Henry, Scarupa, Mark, Wasserman, Richard L., Economides, Athena, White, Martha, Ward, Carla, Shah, Atul, Jones, Douglas, Rathkopf, Melinda, Frye, Kelly, Aybar, Ahmet, Shayegan, Shahrooz, Enav, Benjamin, Ispas, Laura, Loizou, Denise, Fitzhugh, David, Tracy, James, Friedlander, James, Jacobs, Zachary, Matz, Jonathan, Golden, David, McNeil, Donald, McCann, William, Copenhaver, Christopher, Factor, Jeffrey, Gupta, Raavi, Alpan, Oral, Plassmeyer, Matthew, Sønder, Søren Ulrik
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley & Sons, Inc. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9291082/
https://www.ncbi.nlm.nih.gov/pubmed/33539657
http://dx.doi.org/10.1002/cyto.b.21991
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author Kim, Theodore
Yu, Jing
Li, Henry
Scarupa, Mark
Wasserman, Richard L.
Economides, Athena
White, Martha
Ward, Carla
Shah, Atul
Jones, Douglas
Rathkopf, Melinda
Frye, Kelly
Aybar, Ahmet
Shayegan, Shahrooz
Enav, Benjamin
Ispas, Laura
Loizou, Denise
Fitzhugh, David
Tracy, James
Friedlander, James
Jacobs, Zachary
Matz, Jonathan
Golden, David
McNeil, Donald
McCann, William
Copenhaver, Christopher
Factor, Jeffrey
Gupta, Raavi
Alpan, Oral
Plassmeyer, Matthew
Sønder, Søren Ulrik
author_facet Kim, Theodore
Yu, Jing
Li, Henry
Scarupa, Mark
Wasserman, Richard L.
Economides, Athena
White, Martha
Ward, Carla
Shah, Atul
Jones, Douglas
Rathkopf, Melinda
Frye, Kelly
Aybar, Ahmet
Shayegan, Shahrooz
Enav, Benjamin
Ispas, Laura
Loizou, Denise
Fitzhugh, David
Tracy, James
Friedlander, James
Jacobs, Zachary
Matz, Jonathan
Golden, David
McNeil, Donald
McCann, William
Copenhaver, Christopher
Factor, Jeffrey
Gupta, Raavi
Alpan, Oral
Plassmeyer, Matthew
Sønder, Søren Ulrik
author_sort Kim, Theodore
collection PubMed
description BACKGROUND: The short stability window of several hours from blood collection to measuring basophil activation has limited the use of flow cytometry‐based basophil activation assays in clinical settings. We examine if it is possible to extend this window to 1 day allowing for shipment of samples between laboratories. Several options exist for reporting the results including reporting all the measured values directly, calculating ratios and reporting a single value covering all measured results. Each of these options have different stability and value to the physician. METHODS: Whole blood samples from peanut allergic patients were stimulated with four different peanut concentrations at Day 0, Day 1, and Day 2. Samples were stored under temperature‐controlled conditions. Flow cytometry was used to analyze the samples. The basophil activation and degranulation were measured as percentage of positive CD63 basophils and CD203c MFI fold change. Shipped samples were transported under ambient conditions. RESULTS: The results show that CD63 is a stable marker at Day 1. The CD203c ratio decreases significantly at Day 1. Calculating the CD63/IgE ratio proves to be more stable than CD63 alone. The most stable readouts are the semi‐quantitative results and the trajectory of the dose response curve. Finally, we confirmed that the stability can be extended to samples shipped overnight to the laboratory. CONCLUSIONS: It is possible to extend the stability of the basophil activation assay to 1 day for samples stored at 18–25°C as well as samples shipped under ambient conditions as long as the temperature is within the 2–37°C range.
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spelling pubmed-92910822022-07-20 Validation of inducible basophil biomarkers: Time, temperature and transportation Kim, Theodore Yu, Jing Li, Henry Scarupa, Mark Wasserman, Richard L. Economides, Athena White, Martha Ward, Carla Shah, Atul Jones, Douglas Rathkopf, Melinda Frye, Kelly Aybar, Ahmet Shayegan, Shahrooz Enav, Benjamin Ispas, Laura Loizou, Denise Fitzhugh, David Tracy, James Friedlander, James Jacobs, Zachary Matz, Jonathan Golden, David McNeil, Donald McCann, William Copenhaver, Christopher Factor, Jeffrey Gupta, Raavi Alpan, Oral Plassmeyer, Matthew Sønder, Søren Ulrik Cytometry B Clin Cytom Original Articles BACKGROUND: The short stability window of several hours from blood collection to measuring basophil activation has limited the use of flow cytometry‐based basophil activation assays in clinical settings. We examine if it is possible to extend this window to 1 day allowing for shipment of samples between laboratories. Several options exist for reporting the results including reporting all the measured values directly, calculating ratios and reporting a single value covering all measured results. Each of these options have different stability and value to the physician. METHODS: Whole blood samples from peanut allergic patients were stimulated with four different peanut concentrations at Day 0, Day 1, and Day 2. Samples were stored under temperature‐controlled conditions. Flow cytometry was used to analyze the samples. The basophil activation and degranulation were measured as percentage of positive CD63 basophils and CD203c MFI fold change. Shipped samples were transported under ambient conditions. RESULTS: The results show that CD63 is a stable marker at Day 1. The CD203c ratio decreases significantly at Day 1. Calculating the CD63/IgE ratio proves to be more stable than CD63 alone. The most stable readouts are the semi‐quantitative results and the trajectory of the dose response curve. Finally, we confirmed that the stability can be extended to samples shipped overnight to the laboratory. CONCLUSIONS: It is possible to extend the stability of the basophil activation assay to 1 day for samples stored at 18–25°C as well as samples shipped under ambient conditions as long as the temperature is within the 2–37°C range. John Wiley & Sons, Inc. 2021-02-04 2021-11 /pmc/articles/PMC9291082/ /pubmed/33539657 http://dx.doi.org/10.1002/cyto.b.21991 Text en © 2021 The Authors. Cytometry Part B: Clinical Cytometry published by Wiley Periodicals LLC on behalf of International Clinical Cytometry Society. https://creativecommons.org/licenses/by-nc/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited and is not used for commercial purposes.
spellingShingle Original Articles
Kim, Theodore
Yu, Jing
Li, Henry
Scarupa, Mark
Wasserman, Richard L.
Economides, Athena
White, Martha
Ward, Carla
Shah, Atul
Jones, Douglas
Rathkopf, Melinda
Frye, Kelly
Aybar, Ahmet
Shayegan, Shahrooz
Enav, Benjamin
Ispas, Laura
Loizou, Denise
Fitzhugh, David
Tracy, James
Friedlander, James
Jacobs, Zachary
Matz, Jonathan
Golden, David
McNeil, Donald
McCann, William
Copenhaver, Christopher
Factor, Jeffrey
Gupta, Raavi
Alpan, Oral
Plassmeyer, Matthew
Sønder, Søren Ulrik
Validation of inducible basophil biomarkers: Time, temperature and transportation
title Validation of inducible basophil biomarkers: Time, temperature and transportation
title_full Validation of inducible basophil biomarkers: Time, temperature and transportation
title_fullStr Validation of inducible basophil biomarkers: Time, temperature and transportation
title_full_unstemmed Validation of inducible basophil biomarkers: Time, temperature and transportation
title_short Validation of inducible basophil biomarkers: Time, temperature and transportation
title_sort validation of inducible basophil biomarkers: time, temperature and transportation
topic Original Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9291082/
https://www.ncbi.nlm.nih.gov/pubmed/33539657
http://dx.doi.org/10.1002/cyto.b.21991
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