Cargando…

Epidemiological Evidence for Associations Between Genetic Variants and Osteosarcoma Susceptibility: A Meta-Analysis

BACKGROUND: Previous studies have showed that single nucleotide polymorphisms (SNPs) might be implicated in the pathogenesis of osteosarcoma (OS). Numerous studies involving SNPs with OS risk have been reported; these results, however, remain controversial and no comprehensive research synopsis has...

Descripción completa

Detalles Bibliográficos
Autores principales: Yuan, Dechao, Tian, Jie, Fang, Xiang, Xiong, Yan, Banskota, Nishant, Kuang, Fuguo, Zhang, Wenli, Duan, Hong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9291280/
https://www.ncbi.nlm.nih.gov/pubmed/35860595
http://dx.doi.org/10.3389/fonc.2022.912208
_version_ 1784749107481411584
author Yuan, Dechao
Tian, Jie
Fang, Xiang
Xiong, Yan
Banskota, Nishant
Kuang, Fuguo
Zhang, Wenli
Duan, Hong
author_facet Yuan, Dechao
Tian, Jie
Fang, Xiang
Xiong, Yan
Banskota, Nishant
Kuang, Fuguo
Zhang, Wenli
Duan, Hong
author_sort Yuan, Dechao
collection PubMed
description BACKGROUND: Previous studies have showed that single nucleotide polymorphisms (SNPs) might be implicated in the pathogenesis of osteosarcoma (OS). Numerous studies involving SNPs with OS risk have been reported; these results, however, remain controversial and no comprehensive research synopsis has been performed till now. OBJECTIVE: This study seeks to clarify the relationships between SNPs and OS risk using a comprehensive meta-analysis, and assess epidemiological evidence of significant associations. METHODS: The PubMed, Web of Science, and Medline were used to screen for articles that evaluated the association between SNP and OS susceptibility in humans before 24 December 2021. Furthermore, we used Venice Criteria and a false positive report probability (FPRP) test to assess the grades of epidemiological evidence for the statistical relationships. RESULTS: We extracted useful data based on 43 articles, including 10,255 cases and 13,733 controls. Our results presented that 25 SNPs in 17 genes were significantly associated with OS risk. Finally, we graded strong evidence for 17 SNPs in 14 genes with OS risk (APE1 rs1760944, BCAS1 rs3787547, CTLA4 rs231775, ERCC3 rs4150506, HOTAIR rs7958904, IL6 rs1800795, IL8 rs4073, MTAP rs7023329 and rs7027989, PRKCG rs454006, RECQL5 rs820196, TP53 rs1042522, VEGF rs3025039, rs699947 and rs2010963, VMP1 rs1295925, XRCC3 rs861539), moderate for 14 SNPs in 12 genes and weak for 14 SNPs in 11 genes. CONCLUSION: In summary, this study offered a comprehensive meta-analysis between SNPs and OS susceptibility, then evaluated the credibility of statistical relationships, and provided useful information to identify the appropriate candidate SNPs and design future studies to evaluate SNP factors for OS risk.
format Online
Article
Text
id pubmed-9291280
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher Frontiers Media S.A.
record_format MEDLINE/PubMed
spelling pubmed-92912802022-07-19 Epidemiological Evidence for Associations Between Genetic Variants and Osteosarcoma Susceptibility: A Meta-Analysis Yuan, Dechao Tian, Jie Fang, Xiang Xiong, Yan Banskota, Nishant Kuang, Fuguo Zhang, Wenli Duan, Hong Front Oncol Oncology BACKGROUND: Previous studies have showed that single nucleotide polymorphisms (SNPs) might be implicated in the pathogenesis of osteosarcoma (OS). Numerous studies involving SNPs with OS risk have been reported; these results, however, remain controversial and no comprehensive research synopsis has been performed till now. OBJECTIVE: This study seeks to clarify the relationships between SNPs and OS risk using a comprehensive meta-analysis, and assess epidemiological evidence of significant associations. METHODS: The PubMed, Web of Science, and Medline were used to screen for articles that evaluated the association between SNP and OS susceptibility in humans before 24 December 2021. Furthermore, we used Venice Criteria and a false positive report probability (FPRP) test to assess the grades of epidemiological evidence for the statistical relationships. RESULTS: We extracted useful data based on 43 articles, including 10,255 cases and 13,733 controls. Our results presented that 25 SNPs in 17 genes were significantly associated with OS risk. Finally, we graded strong evidence for 17 SNPs in 14 genes with OS risk (APE1 rs1760944, BCAS1 rs3787547, CTLA4 rs231775, ERCC3 rs4150506, HOTAIR rs7958904, IL6 rs1800795, IL8 rs4073, MTAP rs7023329 and rs7027989, PRKCG rs454006, RECQL5 rs820196, TP53 rs1042522, VEGF rs3025039, rs699947 and rs2010963, VMP1 rs1295925, XRCC3 rs861539), moderate for 14 SNPs in 12 genes and weak for 14 SNPs in 11 genes. CONCLUSION: In summary, this study offered a comprehensive meta-analysis between SNPs and OS susceptibility, then evaluated the credibility of statistical relationships, and provided useful information to identify the appropriate candidate SNPs and design future studies to evaluate SNP factors for OS risk. Frontiers Media S.A. 2022-07-04 /pmc/articles/PMC9291280/ /pubmed/35860595 http://dx.doi.org/10.3389/fonc.2022.912208 Text en Copyright © 2022 Yuan, Tian, Fang, Xiong, Banskota, Kuang, Zhang and Duan https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Oncology
Yuan, Dechao
Tian, Jie
Fang, Xiang
Xiong, Yan
Banskota, Nishant
Kuang, Fuguo
Zhang, Wenli
Duan, Hong
Epidemiological Evidence for Associations Between Genetic Variants and Osteosarcoma Susceptibility: A Meta-Analysis
title Epidemiological Evidence for Associations Between Genetic Variants and Osteosarcoma Susceptibility: A Meta-Analysis
title_full Epidemiological Evidence for Associations Between Genetic Variants and Osteosarcoma Susceptibility: A Meta-Analysis
title_fullStr Epidemiological Evidence for Associations Between Genetic Variants and Osteosarcoma Susceptibility: A Meta-Analysis
title_full_unstemmed Epidemiological Evidence for Associations Between Genetic Variants and Osteosarcoma Susceptibility: A Meta-Analysis
title_short Epidemiological Evidence for Associations Between Genetic Variants and Osteosarcoma Susceptibility: A Meta-Analysis
title_sort epidemiological evidence for associations between genetic variants and osteosarcoma susceptibility: a meta-analysis
topic Oncology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9291280/
https://www.ncbi.nlm.nih.gov/pubmed/35860595
http://dx.doi.org/10.3389/fonc.2022.912208
work_keys_str_mv AT yuandechao epidemiologicalevidenceforassociationsbetweengeneticvariantsandosteosarcomasusceptibilityametaanalysis
AT tianjie epidemiologicalevidenceforassociationsbetweengeneticvariantsandosteosarcomasusceptibilityametaanalysis
AT fangxiang epidemiologicalevidenceforassociationsbetweengeneticvariantsandosteosarcomasusceptibilityametaanalysis
AT xiongyan epidemiologicalevidenceforassociationsbetweengeneticvariantsandosteosarcomasusceptibilityametaanalysis
AT banskotanishant epidemiologicalevidenceforassociationsbetweengeneticvariantsandosteosarcomasusceptibilityametaanalysis
AT kuangfuguo epidemiologicalevidenceforassociationsbetweengeneticvariantsandosteosarcomasusceptibilityametaanalysis
AT zhangwenli epidemiologicalevidenceforassociationsbetweengeneticvariantsandosteosarcomasusceptibilityametaanalysis
AT duanhong epidemiologicalevidenceforassociationsbetweengeneticvariantsandosteosarcomasusceptibilityametaanalysis