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Investigation of CO(2) Orientational Dynamics through Simulated NMR Line Shapes
The dynamics of carbon dioxide in third generation (i. e., flexible) Metal‐Organic Frameworks (MOFs) can be experimentally observed by (13)C NMR spectroscopy. The obtained line shapes directly correlate with the motion of the adsorbed CO(2), which in turn are readily available from classical molecul...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2021
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9291905/ https://www.ncbi.nlm.nih.gov/pubmed/34487609 http://dx.doi.org/10.1002/cphc.202100489 |
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author | Melix, Patrick Heine, Thomas |
author_facet | Melix, Patrick Heine, Thomas |
author_sort | Melix, Patrick |
collection | PubMed |
description | The dynamics of carbon dioxide in third generation (i. e., flexible) Metal‐Organic Frameworks (MOFs) can be experimentally observed by (13)C NMR spectroscopy. The obtained line shapes directly correlate with the motion of the adsorbed CO(2), which in turn are readily available from classical molecular dynamics (MD) simulations. In this article, we present our publicly available implementation of an algorithm to calculate NMR line shapes from MD trajectories in a matter of minutes on any current personal computer. We apply the methodology to study an effect observed experimentally when adsorbing CO(2) in different samples of the pillared layer MOF Ni(2)(ndc)(2)(dabco) (ndc=2,6‐naphthalene‐dicarboxylate, dabco=1,4‐diazabicyclo‐[2.2.2]‐octane), also known as DUT‐8(Ni). In (13)C NMR experiments of adsorbed CO(2) in this MOF, small (rigid) crystals result in narrower NMR line shapes than larger (flexible) crystals. The reasons for the higher mobility of CO(2) inside the smaller crystals is unknown. Our ligand field molecular mechanics simulations provide atomistic insight into the effects visible in NMR experiments with limited computational effort. |
format | Online Article Text |
id | pubmed-9291905 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-92919052022-07-20 Investigation of CO(2) Orientational Dynamics through Simulated NMR Line Shapes Melix, Patrick Heine, Thomas Chemphyschem Articles The dynamics of carbon dioxide in third generation (i. e., flexible) Metal‐Organic Frameworks (MOFs) can be experimentally observed by (13)C NMR spectroscopy. The obtained line shapes directly correlate with the motion of the adsorbed CO(2), which in turn are readily available from classical molecular dynamics (MD) simulations. In this article, we present our publicly available implementation of an algorithm to calculate NMR line shapes from MD trajectories in a matter of minutes on any current personal computer. We apply the methodology to study an effect observed experimentally when adsorbing CO(2) in different samples of the pillared layer MOF Ni(2)(ndc)(2)(dabco) (ndc=2,6‐naphthalene‐dicarboxylate, dabco=1,4‐diazabicyclo‐[2.2.2]‐octane), also known as DUT‐8(Ni). In (13)C NMR experiments of adsorbed CO(2) in this MOF, small (rigid) crystals result in narrower NMR line shapes than larger (flexible) crystals. The reasons for the higher mobility of CO(2) inside the smaller crystals is unknown. Our ligand field molecular mechanics simulations provide atomistic insight into the effects visible in NMR experiments with limited computational effort. John Wiley and Sons Inc. 2021-09-23 2021-11-18 /pmc/articles/PMC9291905/ /pubmed/34487609 http://dx.doi.org/10.1002/cphc.202100489 Text en © 2021 The Authors. ChemPhysChem published by Wiley-VCH GmbH https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Articles Melix, Patrick Heine, Thomas Investigation of CO(2) Orientational Dynamics through Simulated NMR Line Shapes |
title | Investigation of CO(2) Orientational Dynamics through Simulated NMR Line Shapes
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title_full | Investigation of CO(2) Orientational Dynamics through Simulated NMR Line Shapes
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title_fullStr | Investigation of CO(2) Orientational Dynamics through Simulated NMR Line Shapes
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title_full_unstemmed | Investigation of CO(2) Orientational Dynamics through Simulated NMR Line Shapes
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title_short | Investigation of CO(2) Orientational Dynamics through Simulated NMR Line Shapes
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title_sort | investigation of co(2) orientational dynamics through simulated nmr line shapes |
topic | Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9291905/ https://www.ncbi.nlm.nih.gov/pubmed/34487609 http://dx.doi.org/10.1002/cphc.202100489 |
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