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Investigation of CO(2) Orientational Dynamics through Simulated NMR Line Shapes

The dynamics of carbon dioxide in third generation (i. e., flexible) Metal‐Organic Frameworks (MOFs) can be experimentally observed by (13)C NMR spectroscopy. The obtained line shapes directly correlate with the motion of the adsorbed CO(2), which in turn are readily available from classical molecul...

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Autores principales: Melix, Patrick, Heine, Thomas
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9291905/
https://www.ncbi.nlm.nih.gov/pubmed/34487609
http://dx.doi.org/10.1002/cphc.202100489
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author Melix, Patrick
Heine, Thomas
author_facet Melix, Patrick
Heine, Thomas
author_sort Melix, Patrick
collection PubMed
description The dynamics of carbon dioxide in third generation (i. e., flexible) Metal‐Organic Frameworks (MOFs) can be experimentally observed by (13)C NMR spectroscopy. The obtained line shapes directly correlate with the motion of the adsorbed CO(2), which in turn are readily available from classical molecular dynamics (MD) simulations. In this article, we present our publicly available implementation of an algorithm to calculate NMR line shapes from MD trajectories in a matter of minutes on any current personal computer. We apply the methodology to study an effect observed experimentally when adsorbing CO(2) in different samples of the pillared layer MOF Ni(2)(ndc)(2)(dabco) (ndc=2,6‐naphthalene‐dicarboxylate, dabco=1,4‐diazabicyclo‐[2.2.2]‐octane), also known as DUT‐8(Ni). In (13)C NMR experiments of adsorbed CO(2) in this MOF, small (rigid) crystals result in narrower NMR line shapes than larger (flexible) crystals. The reasons for the higher mobility of CO(2) inside the smaller crystals is unknown. Our ligand field molecular mechanics simulations provide atomistic insight into the effects visible in NMR experiments with limited computational effort.
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spelling pubmed-92919052022-07-20 Investigation of CO(2) Orientational Dynamics through Simulated NMR Line Shapes Melix, Patrick Heine, Thomas Chemphyschem Articles The dynamics of carbon dioxide in third generation (i. e., flexible) Metal‐Organic Frameworks (MOFs) can be experimentally observed by (13)C NMR spectroscopy. The obtained line shapes directly correlate with the motion of the adsorbed CO(2), which in turn are readily available from classical molecular dynamics (MD) simulations. In this article, we present our publicly available implementation of an algorithm to calculate NMR line shapes from MD trajectories in a matter of minutes on any current personal computer. We apply the methodology to study an effect observed experimentally when adsorbing CO(2) in different samples of the pillared layer MOF Ni(2)(ndc)(2)(dabco) (ndc=2,6‐naphthalene‐dicarboxylate, dabco=1,4‐diazabicyclo‐[2.2.2]‐octane), also known as DUT‐8(Ni). In (13)C NMR experiments of adsorbed CO(2) in this MOF, small (rigid) crystals result in narrower NMR line shapes than larger (flexible) crystals. The reasons for the higher mobility of CO(2) inside the smaller crystals is unknown. Our ligand field molecular mechanics simulations provide atomistic insight into the effects visible in NMR experiments with limited computational effort. John Wiley and Sons Inc. 2021-09-23 2021-11-18 /pmc/articles/PMC9291905/ /pubmed/34487609 http://dx.doi.org/10.1002/cphc.202100489 Text en © 2021 The Authors. ChemPhysChem published by Wiley-VCH GmbH https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Articles
Melix, Patrick
Heine, Thomas
Investigation of CO(2) Orientational Dynamics through Simulated NMR Line Shapes
title Investigation of CO(2) Orientational Dynamics through Simulated NMR Line Shapes
title_full Investigation of CO(2) Orientational Dynamics through Simulated NMR Line Shapes
title_fullStr Investigation of CO(2) Orientational Dynamics through Simulated NMR Line Shapes
title_full_unstemmed Investigation of CO(2) Orientational Dynamics through Simulated NMR Line Shapes
title_short Investigation of CO(2) Orientational Dynamics through Simulated NMR Line Shapes
title_sort investigation of co(2) orientational dynamics through simulated nmr line shapes
topic Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9291905/
https://www.ncbi.nlm.nih.gov/pubmed/34487609
http://dx.doi.org/10.1002/cphc.202100489
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