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Genome sequencing guide: An introductory toolbox to whole‐genome analysis methods

To fully appreciate genetics, one must understand the link between genotype (DNA sequence) and phenotype (observable characteristics). Advances in high‐throughput genomic sequencing technologies and applications, so‐called “‐omics,” have made genetic sequencing readily available across fields in bio...

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Autores principales: Burian, Alexis N., Zhao, Wufan, Lo, Te‐Wen, Thurtle‐Schmidt, Deborah M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley & Sons, Inc. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9291972/
https://www.ncbi.nlm.nih.gov/pubmed/34378845
http://dx.doi.org/10.1002/bmb.21561
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author Burian, Alexis N.
Zhao, Wufan
Lo, Te‐Wen
Thurtle‐Schmidt, Deborah M.
author_facet Burian, Alexis N.
Zhao, Wufan
Lo, Te‐Wen
Thurtle‐Schmidt, Deborah M.
author_sort Burian, Alexis N.
collection PubMed
description To fully appreciate genetics, one must understand the link between genotype (DNA sequence) and phenotype (observable characteristics). Advances in high‐throughput genomic sequencing technologies and applications, so‐called “‐omics,” have made genetic sequencing readily available across fields in biology from applications in non‐traditional study organisms to precision medicine. Thus, understanding these tools is critical for any biologist, especially those early in their career. This comprehensive review discusses the chronological development of different sequencing methods, the bioinformatics steps to analyzing this data, and social and ethical issues raised by these techniques that must be discussed and evaluated, including anticipatory guides and discussion questions for active engagement in the classroom. Additionally, the Supporting Information includes a case study to apply technical and ethical concepts from the text.
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spelling pubmed-92919722022-07-20 Genome sequencing guide: An introductory toolbox to whole‐genome analysis methods Burian, Alexis N. Zhao, Wufan Lo, Te‐Wen Thurtle‐Schmidt, Deborah M. Biochem Mol Biol Educ Topical Review To fully appreciate genetics, one must understand the link between genotype (DNA sequence) and phenotype (observable characteristics). Advances in high‐throughput genomic sequencing technologies and applications, so‐called “‐omics,” have made genetic sequencing readily available across fields in biology from applications in non‐traditional study organisms to precision medicine. Thus, understanding these tools is critical for any biologist, especially those early in their career. This comprehensive review discusses the chronological development of different sequencing methods, the bioinformatics steps to analyzing this data, and social and ethical issues raised by these techniques that must be discussed and evaluated, including anticipatory guides and discussion questions for active engagement in the classroom. Additionally, the Supporting Information includes a case study to apply technical and ethical concepts from the text. John Wiley & Sons, Inc. 2021-08-11 2021 /pmc/articles/PMC9291972/ /pubmed/34378845 http://dx.doi.org/10.1002/bmb.21561 Text en © 2021 The Authors. Biochemistry and Molecular Biology Education published by Wiley Periodicals LLC on behalf of International Union of Biochemistry and Molecular Biology https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc-nd/4.0/ (https://creativecommons.org/licenses/by-nc-nd/4.0/) License, which permits use and distribution in any medium, provided the original work is properly cited, the use is non‐commercial and no modifications or adaptations are made.
spellingShingle Topical Review
Burian, Alexis N.
Zhao, Wufan
Lo, Te‐Wen
Thurtle‐Schmidt, Deborah M.
Genome sequencing guide: An introductory toolbox to whole‐genome analysis methods
title Genome sequencing guide: An introductory toolbox to whole‐genome analysis methods
title_full Genome sequencing guide: An introductory toolbox to whole‐genome analysis methods
title_fullStr Genome sequencing guide: An introductory toolbox to whole‐genome analysis methods
title_full_unstemmed Genome sequencing guide: An introductory toolbox to whole‐genome analysis methods
title_short Genome sequencing guide: An introductory toolbox to whole‐genome analysis methods
title_sort genome sequencing guide: an introductory toolbox to whole‐genome analysis methods
topic Topical Review
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9291972/
https://www.ncbi.nlm.nih.gov/pubmed/34378845
http://dx.doi.org/10.1002/bmb.21561
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