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The geodiv r package: Tools for calculating gradient surface metrics
1. The geodiv r package calculates gradient surface metrics from imagery and other gridded datasets to provide continuous measures of landscape heterogeneity for landscape pattern analysis. 2. geodiv is the first open‐source, command line toolbox for calculating many gradient surface metrics and eas...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9292368/ https://www.ncbi.nlm.nih.gov/pubmed/35874973 http://dx.doi.org/10.1111/2041-210X.13677 |
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author | Smith, Annie C. Dahlin, Kyla M. Record, Sydne Costanza, Jennifer K. Wilson, Adam M. Zarnetske, Phoebe L. |
author_facet | Smith, Annie C. Dahlin, Kyla M. Record, Sydne Costanza, Jennifer K. Wilson, Adam M. Zarnetske, Phoebe L. |
author_sort | Smith, Annie C. |
collection | PubMed |
description | 1. The geodiv r package calculates gradient surface metrics from imagery and other gridded datasets to provide continuous measures of landscape heterogeneity for landscape pattern analysis. 2. geodiv is the first open‐source, command line toolbox for calculating many gradient surface metrics and easily integrates parallel computing for applications with large images or rasters (e.g. remotely sensed data). All functions may be applied either globally to derive a single metric for an entire image or locally to create a texture image over moving windows of a user‐defined extent. 3. We present a comprehensive description of the functions available through geodiv. A supplemental vignette provides an example application of geodiv to the fields of landscape ecology and biogeography. 4. geodiv allows users to easily retrieve estimates of spatial heterogeneity for a variety of purposes, enhancing our understanding of how environmental structure influences ecosystem processes. The package works with any continuous imagery and may be widely applied in many fields where estimates of surface complexity are useful. |
format | Online Article Text |
id | pubmed-9292368 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-92923682022-07-20 The geodiv r package: Tools for calculating gradient surface metrics Smith, Annie C. Dahlin, Kyla M. Record, Sydne Costanza, Jennifer K. Wilson, Adam M. Zarnetske, Phoebe L. Methods Ecol Evol Applications 1. The geodiv r package calculates gradient surface metrics from imagery and other gridded datasets to provide continuous measures of landscape heterogeneity for landscape pattern analysis. 2. geodiv is the first open‐source, command line toolbox for calculating many gradient surface metrics and easily integrates parallel computing for applications with large images or rasters (e.g. remotely sensed data). All functions may be applied either globally to derive a single metric for an entire image or locally to create a texture image over moving windows of a user‐defined extent. 3. We present a comprehensive description of the functions available through geodiv. A supplemental vignette provides an example application of geodiv to the fields of landscape ecology and biogeography. 4. geodiv allows users to easily retrieve estimates of spatial heterogeneity for a variety of purposes, enhancing our understanding of how environmental structure influences ecosystem processes. The package works with any continuous imagery and may be widely applied in many fields where estimates of surface complexity are useful. John Wiley and Sons Inc. 2021-08-02 2021-11 /pmc/articles/PMC9292368/ /pubmed/35874973 http://dx.doi.org/10.1111/2041-210X.13677 Text en © 2021 The Authors. Methods in Ecology and Evolution published by John Wiley & Sons Ltd on behalf of British Ecological Society https://creativecommons.org/licenses/by-nc/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited and is not used for commercial purposes. |
spellingShingle | Applications Smith, Annie C. Dahlin, Kyla M. Record, Sydne Costanza, Jennifer K. Wilson, Adam M. Zarnetske, Phoebe L. The geodiv r package: Tools for calculating gradient surface metrics |
title | The geodiv r package: Tools for calculating gradient surface metrics |
title_full | The geodiv r package: Tools for calculating gradient surface metrics |
title_fullStr | The geodiv r package: Tools for calculating gradient surface metrics |
title_full_unstemmed | The geodiv r package: Tools for calculating gradient surface metrics |
title_short | The geodiv r package: Tools for calculating gradient surface metrics |
title_sort | geodiv r package: tools for calculating gradient surface metrics |
topic | Applications |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9292368/ https://www.ncbi.nlm.nih.gov/pubmed/35874973 http://dx.doi.org/10.1111/2041-210X.13677 |
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