Cargando…
Propensity score‐adjusted three‐component mixture model for drug‐drug interaction data mining in FDA Adverse Event Reporting System
With increasing trend of polypharmacy, drug‐drug interaction (DDI)‐induced adverse drug events (ADEs) are considered as a major challenge for clinical practice. As premarketing clinical trials usually have stringent inclusion/exclusion criteria, limited comedication data capture and often times smal...
Autores principales: | , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley & Sons, Inc.
2019
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9292662/ https://www.ncbi.nlm.nih.gov/pubmed/31880829 http://dx.doi.org/10.1002/sim.8457 |
_version_ | 1784749424650485760 |
---|---|
author | Wang, Xueying Li, Lang Wang, Lei Feng, Weixing Zhang, Pengyue |
author_facet | Wang, Xueying Li, Lang Wang, Lei Feng, Weixing Zhang, Pengyue |
author_sort | Wang, Xueying |
collection | PubMed |
description | With increasing trend of polypharmacy, drug‐drug interaction (DDI)‐induced adverse drug events (ADEs) are considered as a major challenge for clinical practice. As premarketing clinical trials usually have stringent inclusion/exclusion criteria, limited comedication data capture and often times small sample size have limited values in study DDIs. On the other hand, ADE reports collected by spontaneous reporting system (SRS) become an important source for DDI studies. There are two major challenges in detecting DDI signals from SRS: confounding bias and false positive rate. In this article, we propose a novel approach, propensity score‐adjusted three‐component mixture model (PS‐3CMM). This model can simultaneously adjust for confounding bias and estimate false discovery rate for all drug‐drug‐ADE combinations in FDA Adverse Event Reporting System (FAERS), which is a preeminent SRS database. In simulation studies, PS‐3CMM performs better in detecting true DDIs comparing to the existing approach. It is more sensitive in selecting the DDI signals that have nonpositive individual drug relative ADE risk (NPIRR). The application of PS‐3CMM is illustrated in analyzing the FAERS database. Compared to the existing approaches, PS‐3CMM prioritizes DDI signals differently. PS‐3CMM gives high priorities to DDI signals that have NPIRR. Both simulation studies and FAERS data analysis conclude that our new PS‐3CMM is a new method that is complement to the existing DDI signal detection methods. |
format | Online Article Text |
id | pubmed-9292662 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | John Wiley & Sons, Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-92926622022-07-20 Propensity score‐adjusted three‐component mixture model for drug‐drug interaction data mining in FDA Adverse Event Reporting System Wang, Xueying Li, Lang Wang, Lei Feng, Weixing Zhang, Pengyue Stat Med Research Articles With increasing trend of polypharmacy, drug‐drug interaction (DDI)‐induced adverse drug events (ADEs) are considered as a major challenge for clinical practice. As premarketing clinical trials usually have stringent inclusion/exclusion criteria, limited comedication data capture and often times small sample size have limited values in study DDIs. On the other hand, ADE reports collected by spontaneous reporting system (SRS) become an important source for DDI studies. There are two major challenges in detecting DDI signals from SRS: confounding bias and false positive rate. In this article, we propose a novel approach, propensity score‐adjusted three‐component mixture model (PS‐3CMM). This model can simultaneously adjust for confounding bias and estimate false discovery rate for all drug‐drug‐ADE combinations in FDA Adverse Event Reporting System (FAERS), which is a preeminent SRS database. In simulation studies, PS‐3CMM performs better in detecting true DDIs comparing to the existing approach. It is more sensitive in selecting the DDI signals that have nonpositive individual drug relative ADE risk (NPIRR). The application of PS‐3CMM is illustrated in analyzing the FAERS database. Compared to the existing approaches, PS‐3CMM prioritizes DDI signals differently. PS‐3CMM gives high priorities to DDI signals that have NPIRR. Both simulation studies and FAERS data analysis conclude that our new PS‐3CMM is a new method that is complement to the existing DDI signal detection methods. John Wiley & Sons, Inc. 2019-12-27 2020-03-30 /pmc/articles/PMC9292662/ /pubmed/31880829 http://dx.doi.org/10.1002/sim.8457 Text en © 2019 The Authors. Statistics in Medicine published by John Wiley & Sons, Ltd. https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Articles Wang, Xueying Li, Lang Wang, Lei Feng, Weixing Zhang, Pengyue Propensity score‐adjusted three‐component mixture model for drug‐drug interaction data mining in FDA Adverse Event Reporting System |
title | Propensity score‐adjusted three‐component mixture model for drug‐drug interaction data mining in FDA Adverse Event Reporting System |
title_full | Propensity score‐adjusted three‐component mixture model for drug‐drug interaction data mining in FDA Adverse Event Reporting System |
title_fullStr | Propensity score‐adjusted three‐component mixture model for drug‐drug interaction data mining in FDA Adverse Event Reporting System |
title_full_unstemmed | Propensity score‐adjusted three‐component mixture model for drug‐drug interaction data mining in FDA Adverse Event Reporting System |
title_short | Propensity score‐adjusted three‐component mixture model for drug‐drug interaction data mining in FDA Adverse Event Reporting System |
title_sort | propensity score‐adjusted three‐component mixture model for drug‐drug interaction data mining in fda adverse event reporting system |
topic | Research Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9292662/ https://www.ncbi.nlm.nih.gov/pubmed/31880829 http://dx.doi.org/10.1002/sim.8457 |
work_keys_str_mv | AT wangxueying propensityscoreadjustedthreecomponentmixturemodelfordrugdruginteractiondatamininginfdaadverseeventreportingsystem AT lilang propensityscoreadjustedthreecomponentmixturemodelfordrugdruginteractiondatamininginfdaadverseeventreportingsystem AT wanglei propensityscoreadjustedthreecomponentmixturemodelfordrugdruginteractiondatamininginfdaadverseeventreportingsystem AT fengweixing propensityscoreadjustedthreecomponentmixturemodelfordrugdruginteractiondatamininginfdaadverseeventreportingsystem AT zhangpengyue propensityscoreadjustedthreecomponentmixturemodelfordrugdruginteractiondatamininginfdaadverseeventreportingsystem |