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Construction and application of COVID-19 infectors activity information knowledge graph
During COVID-19 prevention and control, people need to be aware of the outbreak situation in their area to avoid being inconvenienced by the outbreak and even becoming infected. Thus, this project constructs a knowledge graph with COVID-19 infector activity information, by using the official flow in...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier Ltd.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9293382/ https://www.ncbi.nlm.nih.gov/pubmed/35872411 http://dx.doi.org/10.1016/j.compbiomed.2022.105908 |
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author | Chen, Liming Liu, Dong Yang, Junkai Jiang, Mingyue Liu, Shouqiang Wang, Yang |
author_facet | Chen, Liming Liu, Dong Yang, Junkai Jiang, Mingyue Liu, Shouqiang Wang, Yang |
author_sort | Chen, Liming |
collection | PubMed |
description | During COVID-19 prevention and control, people need to be aware of the outbreak situation in their area to avoid being inconvenienced by the outbreak and even becoming infected. Thus, this project constructs a knowledge graph with COVID-19 infector activity information, by using the official flow information of the infected people from the provincial and municipal websites. This knowledge graph is the basis of the COVID-19 applications for tracing, visualization and reporting proposes. In the implementation process, we (1) collect a dataset with the information on COVID-19 cases from the prevention and control centers, (2) extract the entity elements with a Bert + BILSTM + CRF-based model, and (3) pre-process the dataset and construct a knowledge graph with manual annotation and human-based review. Finally, we use the knowledge graph to develop a web-based application to implement the question and answer, query, transmission path tracking and the "No.0" tracing infector functions. |
format | Online Article Text |
id | pubmed-9293382 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Elsevier Ltd. |
record_format | MEDLINE/PubMed |
spelling | pubmed-92933822022-07-19 Construction and application of COVID-19 infectors activity information knowledge graph Chen, Liming Liu, Dong Yang, Junkai Jiang, Mingyue Liu, Shouqiang Wang, Yang Comput Biol Med Article During COVID-19 prevention and control, people need to be aware of the outbreak situation in their area to avoid being inconvenienced by the outbreak and even becoming infected. Thus, this project constructs a knowledge graph with COVID-19 infector activity information, by using the official flow information of the infected people from the provincial and municipal websites. This knowledge graph is the basis of the COVID-19 applications for tracing, visualization and reporting proposes. In the implementation process, we (1) collect a dataset with the information on COVID-19 cases from the prevention and control centers, (2) extract the entity elements with a Bert + BILSTM + CRF-based model, and (3) pre-process the dataset and construct a knowledge graph with manual annotation and human-based review. Finally, we use the knowledge graph to develop a web-based application to implement the question and answer, query, transmission path tracking and the "No.0" tracing infector functions. Elsevier Ltd. 2022-09 2022-07-19 /pmc/articles/PMC9293382/ /pubmed/35872411 http://dx.doi.org/10.1016/j.compbiomed.2022.105908 Text en © 2022 Elsevier Ltd. All rights reserved. Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active. |
spellingShingle | Article Chen, Liming Liu, Dong Yang, Junkai Jiang, Mingyue Liu, Shouqiang Wang, Yang Construction and application of COVID-19 infectors activity information knowledge graph |
title | Construction and application of COVID-19 infectors activity information knowledge graph |
title_full | Construction and application of COVID-19 infectors activity information knowledge graph |
title_fullStr | Construction and application of COVID-19 infectors activity information knowledge graph |
title_full_unstemmed | Construction and application of COVID-19 infectors activity information knowledge graph |
title_short | Construction and application of COVID-19 infectors activity information knowledge graph |
title_sort | construction and application of covid-19 infectors activity information knowledge graph |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9293382/ https://www.ncbi.nlm.nih.gov/pubmed/35872411 http://dx.doi.org/10.1016/j.compbiomed.2022.105908 |
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