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A new method for quantitative analysis of M13 bacteriophage by atomic force microscopy

Quantitative analysis is essential for virus research, especially in determining the virus titer. The classical method plaque assay is time-consuming, complex, and difficult for the phages that cannot form apparent plaque on the solid medium. In order to realize rapid and effective detection, a new...

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Detalles Bibliográficos
Autores principales: Wu, Yuting, Liu, Shuai, Liu, Zhiwei, Liu, Bing, Du, Bin, Tong, Zhaoyang, Xu, Jianjie
Formato: Online Artículo Texto
Lenguaje:English
Publicado: KeAi Publishing 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9293941/
https://www.ncbi.nlm.nih.gov/pubmed/35891946
http://dx.doi.org/10.1016/j.synbio.2022.07.001
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author Wu, Yuting
Liu, Shuai
Liu, Zhiwei
Liu, Bing
Du, Bin
Tong, Zhaoyang
Xu, Jianjie
author_facet Wu, Yuting
Liu, Shuai
Liu, Zhiwei
Liu, Bing
Du, Bin
Tong, Zhaoyang
Xu, Jianjie
author_sort Wu, Yuting
collection PubMed
description Quantitative analysis is essential for virus research, especially in determining the virus titer. The classical method plaque assay is time-consuming, complex, and difficult for the phages that cannot form apparent plaque on the solid medium. In order to realize rapid and effective detection, a new method combining atomic force microscopy (AFM) observation and mathematical calculation is established. In this research, M13 phages with an appropriate dilution ratio were observed and counted by AFM. Based on the counting results, the titer of M13 phages can be calculated simply through mathematical substitution. Instead of cultivating overnight in plaque assay, this new method can be implemented within a few hours. Moreover, it is a method that can achieve visualization for titer determination and have the potential to determine the phages that fail to form apparent plaque, which is significant in virus quantitative assessment.
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spelling pubmed-92939412022-07-25 A new method for quantitative analysis of M13 bacteriophage by atomic force microscopy Wu, Yuting Liu, Shuai Liu, Zhiwei Liu, Bing Du, Bin Tong, Zhaoyang Xu, Jianjie Synth Syst Biotechnol Original Research Article Quantitative analysis is essential for virus research, especially in determining the virus titer. The classical method plaque assay is time-consuming, complex, and difficult for the phages that cannot form apparent plaque on the solid medium. In order to realize rapid and effective detection, a new method combining atomic force microscopy (AFM) observation and mathematical calculation is established. In this research, M13 phages with an appropriate dilution ratio were observed and counted by AFM. Based on the counting results, the titer of M13 phages can be calculated simply through mathematical substitution. Instead of cultivating overnight in plaque assay, this new method can be implemented within a few hours. Moreover, it is a method that can achieve visualization for titer determination and have the potential to determine the phages that fail to form apparent plaque, which is significant in virus quantitative assessment. KeAi Publishing 2022-07-13 /pmc/articles/PMC9293941/ /pubmed/35891946 http://dx.doi.org/10.1016/j.synbio.2022.07.001 Text en © 2022 The Authors https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Original Research Article
Wu, Yuting
Liu, Shuai
Liu, Zhiwei
Liu, Bing
Du, Bin
Tong, Zhaoyang
Xu, Jianjie
A new method for quantitative analysis of M13 bacteriophage by atomic force microscopy
title A new method for quantitative analysis of M13 bacteriophage by atomic force microscopy
title_full A new method for quantitative analysis of M13 bacteriophage by atomic force microscopy
title_fullStr A new method for quantitative analysis of M13 bacteriophage by atomic force microscopy
title_full_unstemmed A new method for quantitative analysis of M13 bacteriophage by atomic force microscopy
title_short A new method for quantitative analysis of M13 bacteriophage by atomic force microscopy
title_sort new method for quantitative analysis of m13 bacteriophage by atomic force microscopy
topic Original Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9293941/
https://www.ncbi.nlm.nih.gov/pubmed/35891946
http://dx.doi.org/10.1016/j.synbio.2022.07.001
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